RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 MTFMTQ96DP5 389 aaKnown RBP17.26■□□□□ 0.35
RAB39A-201ENST00000320578 ASB9Q96DX5 294 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 ADA2Q9NZK5 511 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 PPT2Q9UMR5 302 aa17.26■□□□□ 0.35
RAB39A-201ENST00000320578 C15orf38-AP3S2A0A0A6YYH1 394 aa17.25■□□□□ 0.35
RAB39A-201ENST00000320578 ASPDHA6ND91 283 aa17.25■□□□□ 0.35
RAB39A-201ENST00000320578 FXYD1O00168 92 aa17.25■□□□□ 0.35
RAB39A-201ENST00000320578 BCAS2O75934 225 aaPredicted RBP17.25■□□□□ 0.35
RAB39A-201ENST00000320578 IL6P05231 212 aa17.25■□□□□ 0.35
RAB39A-201ENST00000320578 CLNS1AP54105 237 aaKnown RBP17.25■□□□□ 0.35
RAB39A-201ENST00000320578 SLC34A1Q06495 639 aa17.25■□□□□ 0.35
RAB39A-201ENST00000320578 CCDC6Q16204 474 aa17.25■□□□□ 0.35
RAB39A-201ENST00000320578 HIST2H2ACQ16777 129 aaPredicted RBP17.25■□□□□ 0.35
RAB39A-201ENST00000320578 HIST2H2AA3Q6FI13 130 aa17.25■□□□□ 0.35
RAB39A-201ENST00000320578 ARPINQ7Z6K5 226 aa17.25■□□□□ 0.35
RAB39A-201ENST00000320578 LIX1Q8N485 282 aa17.25■□□□□ 0.35
RAB39A-201ENST00000320578 RAB42Q8N4Z0 105 aa17.25■□□□□ 0.35
RAB39A-201ENST00000320578 OR7G3Q8NG95 312 aa17.25■□□□□ 0.35
RAB39A-201ENST00000320578 CCDC124Q96CT7 223 aaKnown RBP17.25■□□□□ 0.35
RAB39A-201ENST00000320578 MENTQ9BUN1 341 aa17.25■□□□□ 0.35
RAB39A-201ENST00000320578 DPY30Q9C005 99 aa17.25■□□□□ 0.35
RAB39A-201ENST00000320578 CLMPQ9H6B4 373 aa17.25■□□□□ 0.35
RAB39A-201ENST00000320578 MVB12BQ9H7P6 319 aa17.25■□□□□ 0.35
RAB39A-201ENST00000320578 S100A14Q9HCY8 104 aa17.25■□□□□ 0.35
RAB39A-201ENST00000320578 SIRT5Q9NXA8 310 aa17.25■□□□□ 0.35
RAB39A-201ENST00000320578 VPS29Q9UBQ0 182 aa17.25■□□□□ 0.35
RAB39A-201ENST00000320578 EBF1Q9UH73 591 aa17.25■□□□□ 0.35
RAB39A-201ENST00000320578 ANGPTL2Q9UKU9 493 aa17.25■□□□□ 0.35
RAB39A-201ENST00000320578 L3MBTL1Q9Y468 752 aa17.25■□□□□ 0.35
RAB39A-201ENST00000320578 TNRC18O15417 2968 aaPredicted RBP17.25■□□□□ 0.35
RAB39A-201ENST00000320578 PRSS38A1L453 326 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 ACOT8O14734 319 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 PRMT3O60678 531 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 SEMA4FO95754 770 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 OXTRP30559 389 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 AKT2P31751 481 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 TRIM25Q14258 630 aaKnown RBP17.24■□□□□ 0.35
RAB39A-201ENST00000320578 PRAMEF14Q5SWL7 426 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 PRAMEF13Q5VWM6 474 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 WASH2PQ6VEQ5 465 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 DNAJB8Q8NHS0 232 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 SMPDL3AQ92484 453 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 C11orf24Q96F05 449 aaPredicted RBP17.24■□□□□ 0.35
RAB39A-201ENST00000320578 BMFQ96LC9 184 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 WDR92Q96MX6 357 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 OR2M4Q96R27 311 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 RAB11FIP5Q9BXF6 653 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 PITHD1Q9GZP4 211 aaPredicted RBP17.24■□□□□ 0.35
RAB39A-201ENST00000320578 FZD3Q9NPG1 666 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 WASH6PQ9NQA3 447 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 NMRK1Q9NWW6 199 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 NDRG2Q9UN36 371 aaKnown RBP17.24■□□□□ 0.35
RAB39A-201ENST00000320578 MRPS17Q9Y2R5 130 aaKnown RBP17.24■□□□□ 0.35
RAB39A-201ENST00000320578 ATG2BQ96BY7 2078 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 POM121BA6NF01 834 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 SORBS2O94875 1100 aaKnown RBP17.24■□□□□ 0.35
RAB39A-201ENST00000320578 HSD17B1P14061 328 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 XRCC1P18887 633 aaPredicted RBP17.24■□□□□ 0.35
RAB39A-201ENST00000320578 HTR1BP28222 390 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 C21orf58P58505 322 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 NFYCQ13952 458 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 UAP1L1Q3KQV9 507 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 PTCRAQ6ISU1 281 aaPredicted RBP17.24■□□□□ 0.35
RAB39A-201ENST00000320578 SUSD1Q6UWL2 747 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.24■□□□□ 0.35
RAB39A-201ENST00000320578 EFCAB3Q8N7B9 438 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 LRCH3Q96II8 777 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 ANKRD27Q96NW4 1050 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 INSM2Q96T92 566 aaPredicted RBP17.24■□□□□ 0.35
RAB39A-201ENST00000320578 CDX2Q99626 313 aaPredicted RBP17.24■□□□□ 0.35
RAB39A-201ENST00000320578 EBF2Q9HAK2 575 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 PELI2Q9HAT8 420 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 FGF22Q9HCT0 170 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 CIDEBQ9UHD4 219 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 PSMD13Q9UNM6 376 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 MAPRE3Q9UPY8 281 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 RUVBL1Q9Y265 456 aaKnown RBP17.24■□□□□ 0.35
RAB39A-201ENST00000320578 HEBP2Q9Y5Z4 205 aa17.24■□□□□ 0.35
RAB39A-201ENST00000320578 CD72P21854 359 aa17.23■□□□□ 0.35
RAB39A-201ENST00000320578 SLC6A2P23975 617 aa17.23■□□□□ 0.35
RAB39A-201ENST00000320578 PIK3CBP42338 1070 aa17.23■□□□□ 0.35
RAB39A-201ENST00000320578 HNRNPFP52597 415 aaKnown RBP17.23■□□□□ 0.35
RAB39A-201ENST00000320578 FLOT2Q14254 428 aa17.23■□□□□ 0.35
RAB39A-201ENST00000320578 PAGE3Q5JUK9 113 aa17.23■□□□□ 0.35
RAB39A-201ENST00000320578 ZFP1Q6P2D0 407 aa17.23■□□□□ 0.35
RAB39A-201ENST00000320578 MSANTD1Q6ZTZ1 278 aa17.23■□□□□ 0.35
RAB39A-201ENST00000320578 TMPRSS11BQ86T26 416 aa17.23■□□□□ 0.35
RAB39A-201ENST00000320578 SLC15A3Q8IY34 581 aa17.23■□□□□ 0.35
RAB39A-201ENST00000320578 TMEM145Q8NBT3 493 aa17.23■□□□□ 0.35
RAB39A-201ENST00000320578 HMGB4Q8WW32 186 aa17.23■□□□□ 0.35
RAB39A-201ENST00000320578 VPS33AQ96AX1 596 aa17.23■□□□□ 0.35
RAB39A-201ENST00000320578 TESCQ96BS2 214 aa17.23■□□□□ 0.35
RAB39A-201ENST00000320578 APIPQ96GX9 242 aa17.23■□□□□ 0.35
RAB39A-201ENST00000320578 HHIPQ96QV1 700 aa17.23■□□□□ 0.35
RAB39A-201ENST00000320578 GEMIN8Q9NWZ8 242 aaKnown RBP17.23■□□□□ 0.35
RAB39A-201ENST00000320578 ADGRE2Q9UHX3 823 aa17.23■□□□□ 0.35
RAB39A-201ENST00000320578 DMTF1Q9Y222 760 aa17.23■□□□□ 0.35
RAB39A-201ENST00000320578 WDR37Q9Y2I8 494 aa17.23■□□□□ 0.35
RAB39A-201ENST00000320578 GPSM3Q9Y4H4 160 aa17.23■□□□□ 0.35
RAB39A-201ENST00000320578 PCDHA9Q9Y5H5 950 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms