RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 TBCCQ15814 346 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 RBBP7Q16576 425 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 ICE2Q659A1 982 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 GPRIN3Q6ZVF9 776 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 C17orf64Q86WR6 236 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 ZNF761Q86XN6 746 aaPredicted RBP13.13□□□□□ -0.31
PRPF18-201ENST00000320054 CHCHD4Q8N4Q1 142 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 LMNTD1Q8N9Z9 388 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 FLVCR1-AS1Q8TAF5 88 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 NEIL2Q969S2 332 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 GRAMD1AQ96CP6 724 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 RAB33BQ9H082 229 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 EHD1Q9H4M9 534 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 ZNF395Q9H8N7 513 aaPredicted RBP13.13□□□□□ -0.31
PRPF18-201ENST00000320054 SLCO1B3Q9NPD5 702 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 HRASLS2Q9NWW9 162 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 SPHK1Q9NYA1 384 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 TAC3Q9UHF0 121 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 BTBD3Q9Y2F9 522 aa13.13□□□□□ -0.31
PRPF18-201ENST00000320054 ISM1B1AKI9 464 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 PPP6CO00743 305 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 GIPC1O14908 333 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 WFS1O76024 890 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 CLDN9O95484 217 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 ENO1P06733 434 aaKnown RBP13.12□□□□□ -0.31
PRPF18-201ENST00000320054 VIMP08670 466 aaKnown RBP13.12□□□□□ -0.31
PRPF18-201ENST00000320054 CD59P13987 128 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 AMD1P17707 334 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 TSPAN8P19075 237 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 POLR2CP19387 275 aaPredicted RBP13.12□□□□□ -0.31
PRPF18-201ENST00000320054 HRH2P25021 359 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 CAPZBP47756 277 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 HK2P52789 917 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 GPLD1P80108 840 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 SLC5A12Q1EHB4 618 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 GGTA1PQ4G0N0 100 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 LIPJQ5W064 366 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 ATG9BQ674R7 924 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 ARMC6Q6NXE6 501 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 SLCO4C1Q6ZQN7 724 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 SYVN1Q86TM6 617 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 CUZD1Q86UP6 607 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 CRLF3Q8IUI8 442 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 L3MBTL4Q8NA19 623 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 ABHD11Q8NFV4 315 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 OR52B6Q8NGF0 335 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 SLC5A11Q8WWX8 675 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 ATP6V1E2Q96A05 226 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 CHMP6Q96FZ7 201 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 OR2A14Q96R47 310 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 PELI2Q9HAT8 420 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 MID1IP1Q9NPA3 183 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 KCNK4Q9NYG8 393 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 ACTR10Q9NZ32 417 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 EPHA6Q9UF33 1036 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 TRPS1Q9UHF7 1281 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 ZNF225Q9UK10 706 aa13.12□□□□□ -0.31
PRPF18-201ENST00000320054 EP300Q09472 2414 aaPredicted RBP13.12□□□□□ -0.31
PRPF18-201ENST00000320054 IGHV1OR21-1A0A087WYE8 117 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 GMNCA6NCL1 334 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 E7EQ34 232 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 PRAMEF4O60810 478 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 TGDSO95455 350 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 LDOC1O95751 146 aaPredicted RBP13.11□□□□□ -0.31
PRPF18-201ENST00000320054 C1GALT1C1LP0DN25 315 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 MYF5P13349 255 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 UGT2B7P16662 529 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 TYRP1P17643 537 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 MPSTP25325 297 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 PSMB5P28074 263 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 CMPK1P30085 196 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 HNF4AP41235 474 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 RPL14P50914 215 aaKnown RBP13.11□□□□□ -0.31
PRPF18-201ENST00000320054 ERVPABLB-1P60509 514 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 IRF8Q02556 426 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 CHIT1Q13231 466 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 SQSTM1Q13501 440 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 NAA25Q14CX7 972 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 SF1Q15637 639 aaKnown RBP13.11□□□□□ -0.31
PRPF18-201ENST00000320054 AASDHQ4L235 1098 aaPredicted RBP13.11□□□□□ -0.31
PRPF18-201ENST00000320054 PRAMEF9Q5VWM5 478 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 GUSBP11Q6P575 273 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 NXPE4Q6UWF7 544 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 FAM47EQ6ZV65 393 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 SPRED1Q7Z699 444 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 MILR1Q7Z6M3 343 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 LRRC34Q8IZ02 419 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 ZNF781Q8N8C0 355 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 OR2L3Q8NG85 312 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 OR4F6Q8NGB9 312 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 OR4K1Q8NGD4 311 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 OR10G6Q8NH81 332 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 RHBDD1Q8TEB9 315 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 RSC1A1Q92681 617 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 CCDC74AQ96AQ1 378 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 PTCD3Q96EY7 689 aaKnown RBP13.11□□□□□ -0.31
PRPF18-201ENST00000320054 FAR2Q96K12 515 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 EFCAB11Q9BUY7 163 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 ACAT2Q9BWD1 397 aa13.11□□□□□ -0.31
PRPF18-201ENST00000320054 SLC29A3Q9BZD2 475 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms