RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 CPA6Q8N4T0 437 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 DRAXINQ8NBI3 349 aaPredicted RBP13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 GPR26Q8NDV2 337 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 VANGL1Q8TAA9 524 aaPredicted RBP13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 XAGE5Q8WWM1 108 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 MYDGFQ969H8 173 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 EFCAB11Q9BUY7 163 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 ZNF334Q9HCZ1 680 aaPredicted RBP13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 FZD4Q9ULV1 537 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 PCDHB3Q9Y5E6 796 aa13.05□□□□□ -0.32
PCDHB9-201ENST00000316105 TTC3P53804 2025 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 POP7O75817 140 aaKnown RBP13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 NR1D2Q14995 579 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 LAPTM4AQ15012 233 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 ATP6AP1Q15904 470 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 GPAT3Q53EU6 434 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 AFMIDQ63HM1 303 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 NOXRED1Q6NXP6 359 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 MYEOVQ96EZ4 313 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 ZNF514Q96K75 400 aaPredicted RBP13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 EPB41L1Q9H4G0 881 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 ZDHHC7Q9NXF8 308 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 RIMS3Q9UJD0 308 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 OGDHLQ9ULD0 1010 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 GPR45Q9Y5Y3 372 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 CFAP20Q9Y6A4 193 aaKnown RBP13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 TTC34A8MYJ7 566 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 OPN1SWP03999 348 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 APODP05090 189 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 CCR3P51677 355 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 FPGSQ05932 587 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 HSPB3Q12988 150 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 TEAD4Q15561 434 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 TYW3Q6IPR3 259 aaKnown RBP13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 ANKFN1Q8N957 763 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 ZHX1-C8orf76Q96EF9 292 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 TRMT2BQ96GJ1 504 aaKnown RBP13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 PHF12Q96QT6 1004 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 ITM2CQ9NQX7 267 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 EXD2Q9NVH0 621 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 SMOXQ9NWM0 555 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 ZNF282Q9UDV7 671 aaPredicted RBP13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 RGS10O43665 173 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 OR1F1O43749 312 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 CTSKP43235 329 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 CDK9P50750 372 aaKnown RBP13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 RCAN2Q14206 197 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 NCF4Q15080 339 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 SLC14A2Q15849 920 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 SUSD1Q6UWL2 747 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 TMEM125Q96AQ2 219 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 CXorf40BQ96DE9 158 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 TRIB3Q96RU7 358 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 PKMYT1Q99640 499 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 TPT1P8Q9HAU6 139 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 GMPR2Q9P2T1 348 aaKnown RBP13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 GON4LQ3T8J9 2241 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 TNS1Q9HBL0 1735 aaKnown RBP13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 ADAMDEC1O15204 470 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 SERPINB7O75635 380 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 CCNDBP1O95273 360 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 KRT8P05787 483 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 C8BP07358 591 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 SBK3P0C264 359 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 POU2F1P14859 743 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 VEGFBP49765 207 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 SF1Q15637 639 aaKnown RBP13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 TRIM71Q2Q1W2 868 aaKnown RBP13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 ZBED5Q49AG3 693 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 C7orf61Q8IZ16 206 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 CELF5Q8N6W0 485 aaKnown RBP13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 OR14C36Q8NHC7 312 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 RHBDF1Q96CC6 855 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 MYRFLQ96LU7 910 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 ZNF607Q96SK3 696 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 OR51B5Q9H339 312 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 TOR3AQ9H497 397 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 HCFC1R1Q9NWW0 138 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 RWDD3Q9Y3V2 267 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 PRKAB1Q9Y478 270 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 PRSS21Q9Y6M0 314 aa13.04□□□□□ -0.32
PCDHB9-201ENST00000316105 CACNB4O00305 520 aaPredicted RBP13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 PDE9AO76083 593 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 DNTTP04053 509 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 EIF2S1P05198 315 aaKnown RBP13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 IL7RP16871 459 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 RPS3P23396 243 aaKnown RBP eCLIP13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 RPS13P62277 151 aaKnown RBP13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 CDKL1Q00532 357 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 OR2T5Q6IEZ7 315 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 GPR153Q6NV75 609 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 OR2T29Q8NH02 315 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 OR5AK3PQ8NH89 298 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 GLYATL1Q969I3 302 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 PYURFQ96I23 114 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 MAELQ96JY0 434 aaKnown RBP13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 PRRG3Q9BZD7 231 aa13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 TRIT1Q9H3H1 467 aaKnown RBP13.03□□□□□ -0.32
PCDHB9-201ENST00000316105 MTG2Q9H4K7 406 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms