RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 PGRP06401 933 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 UMPSP11172 480 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 HOXB6P17509 224 aaKnown RBP13.3□□□□□ -0.28
DDX54-202ENST00000314045 RUNX1T1Q06455 604 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 SLC2A7Q6PXP3 512 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 ZNF852Q6ZMS4 543 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 EIF3MQ7L2H7 374 aaKnown RBP13.3□□□□□ -0.28
DDX54-202ENST00000314045 GATAD2AQ86YP4 633 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 MFSD6LQ8IWD5 586 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 DNAJB8Q8NHS0 232 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 FNDC11Q9BVV2 318 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 OAS3Q9Y6K5 1087 aaKnown RBP13.3□□□□□ -0.28
DDX54-202ENST00000314045 FAM92AA1XBS5 289 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 OR10H3O60404 316 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 SNNO75324 88 aaPredicted RBP13.29□□□□□ -0.28
DDX54-202ENST00000314045 GBAP04062 536 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 HSMCR30P0CW71 290 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 FATE1Q969F0 183 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 MRPL38Q96DV4 380 aaKnown RBP13.29□□□□□ -0.28
DDX54-202ENST00000314045 ZCCHC3Q9NUD5 404 aaKnown RBP13.29□□□□□ -0.28
DDX54-202ENST00000314045 SUCOQ9UBS9 1254 aaKnown RBP13.29□□□□□ -0.28
DDX54-202ENST00000314045 WASF2Q9Y6W5 498 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 B3GALT2O43825 422 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 ALPPL2P10696 532 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 DRD1P21728 446 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 PSMB9P28065 219 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 NKX3-2P78367 333 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 PRR5P85299 388 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 GRB7Q14451 532 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 NFE2L1Q14494 772 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 PDK3Q15120 406 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 NEDD8Q15843 81 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 IRAK1BP1Q5VVH5 260 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 RERGLQ9H628 205 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 ZNF282Q9UDV7 671 aaPredicted RBP13.29□□□□□ -0.28
DDX54-202ENST00000314045 TRPS1Q9UHF7 1281 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 GMPPBQ9Y5P6 360 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 A0A087WXM4 84 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 CXCR6O00574 342 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 ARRB1P49407 418 aaPredicted RBP13.29□□□□□ -0.28
DDX54-202ENST00000314045 GALK1P51570 392 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 RAB8AP61006 207 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 SH3BP2P78314 561 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 FOLH1Q04609 750 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 ZNF605Q86T29 641 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 VPS35Q96QK1 796 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 OSBPL11Q9BXB4 747 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 FBRSQ9HAH7 460 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 IL37Q9NZH6 218 aa13.29□□□□□ -0.28
DDX54-202ENST00000314045 CDV3Q9UKY7 258 aaKnown RBP13.29□□□□□ -0.28
DDX54-202ENST00000314045 PSMD11O00231 422 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 CLIC1O00299 241 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 EIF3FO00303 357 aaPredicted RBP13.28□□□□□ -0.28
DDX54-202ENST00000314045 NDUFS4O43181 175 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 FOSL2P15408 326 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 TYRP1P17643 537 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 EEFSECP57772 596 aaKnown RBP13.28□□□□□ -0.28
DDX54-202ENST00000314045 TMED1Q13445 227 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 DPPA4Q7L190 304 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 SAMD14Q8IZD0 417 aaPredicted RBP13.28□□□□□ -0.28
DDX54-202ENST00000314045 CAMKK1Q8N5S9 505 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 VANGL1Q8TAA9 524 aaPredicted RBP13.28□□□□□ -0.28
DDX54-202ENST00000314045 ABTB1Q969K4 478 aaPredicted RBP13.28□□□□□ -0.28
DDX54-202ENST00000314045 DNAJC15Q9Y5T4 150 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 PTGDR2Q9Y5Y4 395 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 TRIP12Q14669 1992 aaPredicted RBP13.28□□□□□ -0.28
DDX54-202ENST00000314045 MROH6A6NGR9 719 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 CCNYL3P0C7X3 344 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 MYCLP1P12525 358 aaPredicted RBP13.28□□□□□ -0.28
DDX54-202ENST00000314045 GABRB3P28472 473 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 DLG1Q12959 904 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 EGFLAMQ63HQ2 1017 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 CD300LGQ6UXG3 332 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 KDM1BQ8NB78 822 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 LMX1AQ8TE12 382 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 ZNF689Q96CS4 500 aaPredicted RBP13.28□□□□□ -0.28
DDX54-202ENST00000314045 PKMYT1Q99640 499 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 PDE10AQ9Y233 779 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 DGKBQ9Y6T7 804 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 ATAD5Q96QE3 1844 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 NUMA1Q14980 2115 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 SOBPA7XYQ1 873 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 IGLV3-27P01718 113 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 C1GALT1C1LP0DN25 315 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 UQCRBP14927 111 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 CASP9P55211 416 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 C1orf61Q13536 156 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 RFX4Q33E94 735 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 C9orf50Q5SZB4 431 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 LIPJQ5W064 366 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 TNFAIP8L2Q6P589 184 aaPredicted RBP13.28□□□□□ -0.28
DDX54-202ENST00000314045 PRSS58Q8IYP2 241 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 VN1R2Q8NFZ6 395 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 PCDHGB3Q9Y5G1 929 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 DOCK5Q9H7D0 1870 aa13.28□□□□□ -0.28
DDX54-202ENST00000314045 G3V2T6 193 aa13.27□□□□□ -0.28
DDX54-202ENST00000314045 GTF2E2P29084 291 aaKnown RBP13.27□□□□□ -0.28
DDX54-202ENST00000314045 TRPC1P48995 793 aa13.27□□□□□ -0.28
DDX54-202ENST00000314045 CHN2P52757 468 aa13.27□□□□□ -0.28
DDX54-202ENST00000314045 PTGR1Q14914 329 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms