RNA–Protein interactions for RNA: ENST00000311601.5

SH3PXD2B-201, Transcript of SH3 and PX domains 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3PXD2B, Length 7,777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2B-201ENST00000311601 ATG14Q6ZNE5 492 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 C1orf52Q8N6N3 182 aaKnown RBP13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 PDE7BQ9NP56 450 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 KCTD3Q9Y597 815 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 COQ9O75208 318 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 CYBAP13498 195 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 ANPEPP15144 967 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 ITGA3P26006 1051 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 ACVR2AP27037 513 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 PBX1P40424 430 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 GDF5P43026 501 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 EIF1AXP47813 144 aaKnown RBP13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 CARTPTQ16568 116 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 ZNF311Q5JNZ3 666 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 NAXEQ8NCW5 288 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 OR9A1PQ8NGU1 263 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 GPATCH1Q9BRR8 931 aaKnown RBP13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 IFT80Q9P2H3 777 aaPredicted RBP13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 KIAA0100Q14667 2235 aaKnown RBP13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 UBE2QL1A1L167 161 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 WASHC1A8K0Z3 465 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 WASH3PC4AMC7 463 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 MID1O15344 667 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 GSC2O15499 205 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 ENTPD5O75356 428 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 INMTO95050 263 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 GADD45GO95257 159 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 DECR1Q16698 335 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 CCDC92Q53HC0 331 aaPredicted RBP13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 PDSS1Q5T2R2 415 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 WASH2PQ6VEQ5 465 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 DCAKDQ8WVC6 231 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 COMMD4Q9H0A8 199 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 HMG20AQ9NP66 347 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 ZNF180Q9UJW8 692 aa13.15□□□□□ -0.3
SH3PXD2B-201ENST00000311601 DPY19L3Q6ZPD9 716 aa13.15□□□□□ -0.31
SH3PXD2B-201ENST00000311601 LRRC46Q96FV0 321 aa13.15□□□□□ -0.31
SH3PXD2B-201ENST00000311601 KLHL31Q9H511 634 aa13.15□□□□□ -0.31
SH3PXD2B-201ENST00000311601 SIX2Q9NPC8 291 aa13.15□□□□□ -0.31
SH3PXD2B-201ENST00000311601 ANKRD12Q6UB98 2062 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 CDC40O60508 579 aaKnown RBP eCLIP13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 CDH1P12830 882 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 ZNF41P51814 821 aaPredicted RBP13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 C12orf40Q86WS4 652 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 SH3YL1Q96HL8 342 aaPredicted RBP13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 GIN1Q9NXP7 522 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 SIX4Q9UIU6 781 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 MYOCOSA0A1B0GUC4 107 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 EDF1O60869 148 aaKnown RBP13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 RIPK1Q13546 671 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 FBXO42Q6P3S6 717 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 DCUN1D3Q8IWE4 304 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 SCAMP4Q969E2 229 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 COL21A1Q96P44 957 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 HHIPQ96QV1 700 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 GATA5Q9BWX5 397 aaPredicted RBP13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 USP29Q9HBJ7 922 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 C10orf71Q711Q0 1435 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 TARDBPQ13148 414 aaKnown RBP eCLIP13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 SERINC3Q13530 473 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 NOXRED1Q6NXP6 359 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 TMIGD1Q6UXZ0 262 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 ZBTB46Q86UZ6 589 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 OR10Q1Q8NGQ4 319 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 POP5Q969H6 163 aaKnown RBP13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 PRR11Q96HE9 360 aaPredicted RBP13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 Q9N2J8 555 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 PLOD3O60568 738 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 CCNB2O95067 398 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 HSD11B1P28845 292 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 PRKD1Q15139 912 aaPredicted RBP13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 FRG2Q64ET8 278 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 FRG2BQ96QU4 278 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 C1QTNF1Q9BXJ1 281 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 TCRBV7S3A2A0A539 114 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 UGT2B11O75310 529 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 LDOC1O95751 146 aaPredicted RBP13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 C9P02748 559 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 OTX2P32243 289 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 GALK1P51570 392 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 IKBIPQ70UQ0 350 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 MREGQ8N565 214 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 NAT14Q8WUY8 206 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 AP3S1Q92572 193 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 TBX5Q99593 518 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 COL1A1P02452 1464 aaPredicted RBP13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 PRAMEF11O60813 436 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 C1orf189Q5VU69 101 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 ALG1LQ6GMV1 187 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 RPLP0P6Q8NHW5 317 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 SLC5A11Q8WWX8 675 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 IL1RAPQ9NPH3 570 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 ARL8BQ9NVJ2 186 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 ACSL5Q9ULC5 683 aa13.14□□□□□ -0.31
SH3PXD2B-201ENST00000311601 GRXCR1A8MXD5 290 aa13.13□□□□□ -0.31
SH3PXD2B-201ENST00000311601 TULP3O75386 442 aa13.13□□□□□ -0.31
SH3PXD2B-201ENST00000311601 CAPZA1P52907 286 aa13.13□□□□□ -0.31
SH3PXD2B-201ENST00000311601 RPS13P62277 151 aaKnown RBP13.13□□□□□ -0.31
SH3PXD2B-201ENST00000311601 RPS15P62841 145 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms