RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 HALP42357 657 aa20.25■□□□□ 0.83
RELA-201ENST00000308639 CLK3P49761 638 aaKnown RBP20.25■□□□□ 0.83
RELA-201ENST00000308639 VLDLRP98155 873 aa20.25■□□□□ 0.83
RELA-201ENST00000308639 TUBA3CQ13748 450 aa20.25■□□□□ 0.83
RELA-201ENST00000308639 DGCR6Q14129 220 aa20.25■□□□□ 0.83
RELA-201ENST00000308639 CTF1Q16619 201 aa20.25■□□□□ 0.83
RELA-201ENST00000308639 B3GNT8Q7Z7M8 397 aa20.25■□□□□ 0.83
RELA-201ENST00000308639 COX4I2Q96KJ9 171 aa20.25■□□□□ 0.83
RELA-201ENST00000308639 ALOXE3Q9BYJ1 711 aa20.25■□□□□ 0.83
RELA-201ENST00000308639 SLC29A3Q9BZD2 475 aa20.25■□□□□ 0.83
RELA-201ENST00000308639 CFAP97Q9P2B7 532 aa20.25■□□□□ 0.83
RELA-201ENST00000308639 CPSF4O95639 269 aaKnown RBP20.24■□□□□ 0.83
RELA-201ENST00000308639 INHAP05111 366 aa20.24■□□□□ 0.83
RELA-201ENST00000308639 CKMP06732 381 aa20.24■□□□□ 0.83
RELA-201ENST00000308639 AOAHP28039 575 aa20.24■□□□□ 0.83
RELA-201ENST00000308639 GSSP48637 474 aa20.24■□□□□ 0.83
RELA-201ENST00000308639 FPGSQ05932 587 aa20.24■□□□□ 0.83
RELA-201ENST00000308639 FAR1Q8WVX9 515 aa20.24■□□□□ 0.83
RELA-201ENST00000308639 MTERF1Q99551 399 aaKnown RBP20.24■□□□□ 0.83
RELA-201ENST00000308639 ZDHHC3Q9NYG2 299 aa20.24■□□□□ 0.83
RELA-201ENST00000308639 MAN2B2Q9Y2E5 1009 aa20.24■□□□□ 0.83
RELA-201ENST00000308639 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.24■□□□□ 0.83
RELA-201ENST00000308639 IGSF6O95976 241 aa20.24■□□□□ 0.83
RELA-201ENST00000308639 SERPINA4P29622 427 aa20.24■□□□□ 0.83
RELA-201ENST00000308639 CD6P30203 668 aa20.24■□□□□ 0.83
RELA-201ENST00000308639 RAD23AP54725 363 aa20.24■□□□□ 0.83
RELA-201ENST00000308639 CASP9P55211 416 aa20.24■□□□□ 0.83
RELA-201ENST00000308639 GPR33Q49SQ1 333 aa20.24■□□□□ 0.83
RELA-201ENST00000308639 ZNF621Q6ZSS3 439 aa20.24■□□□□ 0.83
RELA-201ENST00000308639 CYP2U1Q7Z449 544 aa20.24■□□□□ 0.83
RELA-201ENST00000308639 CMTM8Q8IZV2 173 aa20.24■□□□□ 0.83
RELA-201ENST00000308639 OR2AP1Q8NGE2 309 aa20.24■□□□□ 0.83
RELA-201ENST00000308639 NDNFQ8TB73 568 aa20.24■□□□□ 0.83
RELA-201ENST00000308639 REXO5Q96IC2 774 aaKnown RBP20.24■□□□□ 0.83
RELA-201ENST00000308639 ZDHHC6Q9H6R6 413 aa20.24■□□□□ 0.83
RELA-201ENST00000308639 IL21Q9HBE4 155 aa20.24■□□□□ 0.83
RELA-201ENST00000308639 PCDH12Q9NPG4 1184 aa20.24■□□□□ 0.83
RELA-201ENST00000308639 AASDHPPTQ9NRN7 309 aa20.24■□□□□ 0.83
RELA-201ENST00000308639 COQ6Q9Y2Z9 468 aa20.24■□□□□ 0.83
RELA-201ENST00000308639 NDUFS2O75306 463 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 ENGP17813 658 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 TGFBR1P36897 503 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 EPS8Q12929 822 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 GBX1Q14549 363 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 SMU1Q2TAY7 513 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 PLEKHG6Q3KR16 790 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 NOXRED1Q6NXP6 359 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 SCAMP4Q969E2 229 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 TRMT2BQ96GJ1 504 aaKnown RBP20.23■□□□□ 0.83
RELA-201ENST00000308639 PANX1Q96RD7 426 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 RMND5AQ9H871 391 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 PRDM8Q9NQV8 689 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 RASSF1Q9NS23 344 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 ENPP5Q9UJA9 477 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 BTBD3Q9Y2F9 522 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 HTR3EA5X5Y0 456 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 CFAP99D6REC4 459 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 CBFA2T3O75081 653 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 RECQL5O94762 991 aaPredicted RBP20.23■□□□□ 0.83
RELA-201ENST00000308639 UGT2B4P06133 528 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 NUDT7P0C024 238 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 SRCP12931 536 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 CD22P20273 847 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 AQP1P29972 269 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 HS6ST3Q8IZP7 471 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 PIK3C3Q8NEB9 887 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 MAGIXQ9H6Y5 334 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 SNX6Q9UNH7 406 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 ORC6Q9Y5N6 252 aa20.23■□□□□ 0.83
RELA-201ENST00000308639 ZNF106Q9H2Y7 1883 aaKnown RBP20.23■□□□□ 0.83
RELA-201ENST00000308639 CLIC1O00299 241 aa20.22■□□□□ 0.83
RELA-201ENST00000308639 FPGTO14772 594 aa20.22■□□□□ 0.83
RELA-201ENST00000308639 WNT9AO14904 365 aa20.22■□□□□ 0.83
RELA-201ENST00000308639 SERPINB7O75635 380 aa20.22■□□□□ 0.83
RELA-201ENST00000308639 AMD1P17707 334 aa20.22■□□□□ 0.83
RELA-201ENST00000308639 ATN1P54259 1190 aaPredicted RBP20.22■□□□□ 0.83
RELA-201ENST00000308639 GABARAPL2P60520 117 aa20.22■□□□□ 0.83
RELA-201ENST00000308639 ABHD18Q0P651 414 aa20.22■□□□□ 0.83
RELA-201ENST00000308639 CHIT1Q13231 466 aa20.22■□□□□ 0.83
RELA-201ENST00000308639 CYP2A13Q16696 494 aa20.22■□□□□ 0.83
RELA-201ENST00000308639 UGT8Q16880 541 aa20.22■□□□□ 0.83
RELA-201ENST00000308639 TMEM53Q6P2H8 277 aa20.22■□□□□ 0.83
RELA-201ENST00000308639 HIPK1Q86Z02 1210 aa20.22■□□□□ 0.83
RELA-201ENST00000308639 TMCO5AQ8N6Q1 288 aa20.22■□□□□ 0.83
RELA-201ENST00000308639 OR52E4Q8NGH9 312 aa20.22■□□□□ 0.83
RELA-201ENST00000308639 MAGED4Q96JG8 741 aa20.22■□□□□ 0.83
RELA-201ENST00000308639 PRM3Q9NNZ6 103 aa20.22■□□□□ 0.83
RELA-201ENST00000308639 ABCB8Q9NUT2 735 aa20.22■□□□□ 0.83
RELA-201ENST00000308639 SIRT5Q9NXA8 310 aa20.22■□□□□ 0.83
RELA-201ENST00000308639 TMED5Q9Y3A6 229 aa20.22■□□□□ 0.83
RELA-201ENST00000308639 ZNF99A8MXY4 864 aaPredicted RBP20.22■□□□□ 0.83
RELA-201ENST00000308639 SLC16A6O15403 523 aa20.22■□□□□ 0.83
RELA-201ENST00000308639 HOXA2O43364 376 aa20.22■□□□□ 0.83
RELA-201ENST00000308639 C1SP09871 688 aa20.22■□□□□ 0.83
RELA-201ENST00000308639 GABRR2P28476 465 aa20.22■□□□□ 0.83
RELA-201ENST00000308639 CA8P35219 290 aa20.22■□□□□ 0.83
RELA-201ENST00000308639 KIR3DL1P43629 444 aa20.22■□□□□ 0.83
RELA-201ENST00000308639 LYPLAL1Q5VWZ2 237 aa20.22■□□□□ 0.83
RELA-201ENST00000308639 SHQ1Q6PI26 577 aaKnown RBP20.22■□□□□ 0.83
RELA-201ENST00000308639 CEP295NLQ96MC4 621 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms