RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 KCNC3Q14003 757 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 ANKRD46Q86W74 232 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF431Q8TF32 576 aaPredicted RBP7.47□□□□□ -1.21
SF3B3-201ENST00000302516 METTL21AQ8WXB1 218 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 EXOC2Q96KP1 924 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 TIMM22Q9Y584 194 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 H7C2Y5 167 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 M0R036 132 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 OR4F21O95013 312 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 GADD45AP24522 165 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 RYKP34925 604 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 NUMBP49757 651 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 PCDH1Q08174 1060 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 CRY2Q49AN0 593 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 CAND1Q86VP6 1230 aaKnown RBP7.47□□□□□ -1.21
SF3B3-201ENST00000302516 CADM2Q8N3J6 435 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 SLC37A3Q8NCC5 494 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 SLC22A18Q96BI1 424 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 MFSD3Q96ES6 412 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 VPS29Q9UBQ0 182 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 PCDH7O60245 1069 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 CPNE3O75131 537 aaKnown RBP7.47□□□□□ -1.21
SF3B3-201ENST00000302516 IL3P08700 152 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 CFL1P23528 166 aaKnown RBP7.47□□□□□ -1.21
SF3B3-201ENST00000302516 DSTNP60981 165 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 SMU1Q2TAY7 513 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 PRPF38BQ5VTL8 546 aaKnown RBP7.47□□□□□ -1.21
SF3B3-201ENST00000302516 SMARCD3Q6STE5 483 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 GPR142Q7Z601 462 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 ZBTB46Q86UZ6 589 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 HMX1Q9NP08 348 aaPredicted RBP7.47□□□□□ -1.21
SF3B3-201ENST00000302516 HPF1Q9NWY4 346 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 CYTH4Q9UIA0 394 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 PLEKHA6Q9Y2H5 1048 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 COQ4Q9Y3A0 265 aa7.47□□□□□ -1.21
SF3B3-201ENST00000302516 RNF225M0QZC1 329 aaPredicted RBP7.46□□□□□ -1.21
SF3B3-201ENST00000302516 IFI30P13284 250 aa7.46□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF630Q2M218 657 aaPredicted RBP7.46□□□□□ -1.21
SF3B3-201ENST00000302516 RAB12Q6IQ22 244 aa7.46□□□□□ -1.21
SF3B3-201ENST00000302516 NXPE1Q8N323 547 aa7.46□□□□□ -1.21
SF3B3-201ENST00000302516 CLIP4Q8N3C7 705 aa7.46□□□□□ -1.21
SF3B3-201ENST00000302516 FNDC8Q8TC99 324 aa7.46□□□□□ -1.21
SF3B3-201ENST00000302516 ITPKCQ96DU7 683 aa7.46□□□□□ -1.21
SF3B3-201ENST00000302516 TM9SF2Q99805 663 aa7.46□□□□□ -1.21
SF3B3-201ENST00000302516 MAGIXQ9H6Y5 334 aa7.46□□□□□ -1.21
SF3B3-201ENST00000302516 MRPS30Q9NP92 439 aaKnown RBP7.46□□□□□ -1.21
SF3B3-201ENST00000302516 GDAP2Q9NXN4 497 aa7.46□□□□□ -1.21
SF3B3-201ENST00000302516 TEX264Q9Y6I9 313 aa7.46□□□□□ -1.21
SF3B3-201ENST00000302516 DENRO43583 198 aaKnown RBP7.46□□□□□ -1.21
SF3B3-201ENST00000302516 TSPAN1O60635 241 aa7.46□□□□□ -1.21
SF3B3-201ENST00000302516 PABPC4LP0CB38 370 aaKnown RBP7.46□□□□□ -1.21
SF3B3-201ENST00000302516 LAG3P18627 525 aa7.46□□□□□ -1.21
SF3B3-201ENST00000302516 SEC23BQ15437 767 aa7.46□□□□□ -1.21
SF3B3-201ENST00000302516 PEX13Q92968 403 aa7.46□□□□□ -1.21
SF3B3-201ENST00000302516 RNF38Q9H0F5 515 aa7.46□□□□□ -1.21
SF3B3-201ENST00000302516 CD93Q9NPY3 652 aa7.46□□□□□ -1.21
SF3B3-201ENST00000302516 PCDHB16Q9NRJ7 776 aa7.46□□□□□ -1.21
SF3B3-201ENST00000302516 GLUD1P00367 558 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 ITGB1P05556 798 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 GNG2P59768 71 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 MAP2K5Q13163 448 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 TBC1D25Q3MII6 688 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 FIP1L1Q6UN15 594 aaKnown RBP7.46□□□□□ -1.22
SF3B3-201ENST00000302516 ZNF627Q7L945 461 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 CCDC54Q8NEL0 328 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 IL31RAQ8NI17 732 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 SLC35B2Q8TB61 432 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 ZFP3Q96NJ6 502 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 GPR20Q99678 358 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 OSBPL2Q9H1P3 480 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 PCDHA2Q9Y5H9 948 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 MT-ND5P03915 603 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 NDUFS1P28331 727 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 CEBPGP53567 150 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 DCDC5Q6ZRR9 648 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 OR10G6Q8NH81 332 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 KCNC2Q96PR1 638 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 TRIB3Q96RU7 358 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 GPR22Q99680 433 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 ABCG8Q9H221 673 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 ZNF696Q9H7X3 374 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 NLGN3Q9NZ94 848 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 GRID2O43424 1007 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 OR1F1O43749 312 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 MAGP20916 626 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 GRK5P34947 590 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 DCAF12L1Q5VU92 463 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 NCEH1Q6PIU2 408 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 NCCRP1Q6ZVX7 275 aaPredicted RBP7.46□□□□□ -1.22
SF3B3-201ENST00000302516 CHERPQ8IWX8 916 aaKnown RBP7.46□□□□□ -1.22
SF3B3-201ENST00000302516 CENPSQ8N2Z9 138 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 MARVELD2Q8N4S9 558 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 OR4C15Q8NGM1 316 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 KCNN1Q92952 543 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 CCDC32Q9BV29 185 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 SIX2Q9NPC8 291 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 MOCS1Q9NZB8 636 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 CFAP97Q9P2B7 532 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 SMIM28A0A1B0GU29 152 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 ZNF670-ZNF695F2Z2N8 137 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms