RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 GRK3P35626 688 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 CASP2P42575 452 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 BDKRB1P46663 353 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 SLC6A12P48065 614 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 LSSP48449 732 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 KCNC1P48547 511 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 ARL4DP49703 201 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 EMP3P54852 163 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 DLG1Q12959 904 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 E2F2Q14209 437 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 SETDB1Q15047 1291 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 OR4D1Q15615 310 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 TBCCQ15814 346 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 PTCHD3Q3KNS1 767 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 CCSMST1Q4G0I0 132 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 N4BP2L1Q5TBK1 243 aaPredicted RBP8.53□□□□□ -1.04
VPREB1-201ENST00000302273 TMEM164Q5U3C3 297 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 CACHD1Q5VU97 1274 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 YOD1Q5VVQ6 348 aaPredicted RBP8.53□□□□□ -1.04
VPREB1-201ENST00000302273 NKAIN2Q5VXU1 208 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 ICE2Q659A1 982 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 PLD6Q8N2A8 252 aaKnown RBP8.53□□□□□ -1.04
VPREB1-201ENST00000302273 D2HGDHQ8N465 521 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 FBXO39Q8N4B4 442 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 OR4K1Q8NGD4 311 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 FLVCR1-AS1Q8TAF5 88 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 SREK1Q8WXA9 508 aaKnown RBP8.53□□□□□ -1.04
VPREB1-201ENST00000302273 RSC1A1Q92681 617 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 TLCD1Q96CP7 247 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 APOPT1Q96IL0 206 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 TGM7Q96PF1 710 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 NUDT22Q9BRQ3 303 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 CD244Q9BZW8 370 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 PCMTD2Q9NV79 361 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 CD274Q9NZQ7 290 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 PLLPQ9Y342 182 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 PCDHGA3Q9Y5H0 932 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 PCNX2A6NKB5 2137 aa8.53□□□□□ -1.04
VPREB1-201ENST00000302273 ACACBO00763 2458 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 TMEM131Q92545 1883 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 SMIM23A6NLE4 172 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 K7EPI3 171 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 PRPF4O43172 522 aaKnown RBP eCLIP8.52□□□□□ -1.05
VPREB1-201ENST00000302273 TYROBPO43914 113 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 CSO75390 466 aaKnown RBP8.52□□□□□ -1.05
VPREB1-201ENST00000302273 RASSF9O75901 435 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 ZWINTO95229 277 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 GUCA1CO95843 209 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 ADRB1P08588 477 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 GFAPP14136 432 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 EPB42P16452 691 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 IMPDH1P20839 514 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 CD82P27701 267 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 SERPINB1P30740 379 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 MDH1P40925 334 aaKnown RBP8.52□□□□□ -1.05
VPREB1-201ENST00000302273 GRIA3P42263 894 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 PPM1FP49593 454 aaPredicted RBP8.52□□□□□ -1.05
VPREB1-201ENST00000302273 ATP1A2P50993 1020 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 CCR8P51685 355 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 PDX1P52945 283 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 DNAJB13P59910 316 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 TBPL1P62380 186 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 HERVK_113P63132 956 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 IRF9Q00978 393 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 MC2RQ01718 297 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 ZNF33BQ06732 778 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 TARDBPQ13148 414 aaKnown RBP eCLIP8.52□□□□□ -1.05
VPREB1-201ENST00000302273 NAE1Q13564 534 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 LAPTM5Q13571 262 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 RTP5Q14D33 572 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 PAGE2BQ5JRK9 111 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 TCTE1Q5JU00 501 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 THEMIS2Q5TEJ8 643 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 PRAMEF13Q5VWM6 474 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 ZNF425Q6IV72 752 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 NIPAL1Q6NVV3 410 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 RAB11FIP2Q7L804 512 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 EXOC3L1Q86VI1 746 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 C17orf64Q86WR6 236 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 ZNF761Q86XN6 746 aaPredicted RBP8.52□□□□□ -1.05
VPREB1-201ENST00000302273 SRRM1Q8IYB3 904 aaKnown RBP8.52□□□□□ -1.05
VPREB1-201ENST00000302273 KIRREL3Q8IZU9 778 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 SPATA6LQ8N4H0 392 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 TTLQ8NG68 377 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 UBE2E3Q969T4 207 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 WDR34Q96EX3 536 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 SCYL1Q96KG9 808 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 CCDC74BQ96LY2 380 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 TRAPPC9Q96Q05 1148 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 MAP3K3Q99759 626 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 PLCD4Q9BRC7 762 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 TRMOQ9BU70 441 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 DDA1Q9BW61 102 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 ERVK-6Q9BXR3 956 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 XKR8Q9H6D3 395 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 NT5DC2Q9H857 520 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 POLR1BQ9H9Y6 1135 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 FANCEQ9HB96 536 aa8.52□□□□□ -1.05
VPREB1-201ENST00000302273 MRPS30Q9NP92 439 aaKnown RBP8.52□□□□□ -1.05
VPREB1-201ENST00000302273 DNAJC11Q9NVH1 559 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms