RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 NEUROG3Q9Y4Z2 214 aa21.3■■□□□ 1
TPM4-201ENST00000300933 ZNF30P17039 623 aa21.29■■□□□ 1
TPM4-201ENST00000300933 CCNA2P20248 432 aa21.29■■□□□ 1
TPM4-201ENST00000300933 PHC1P78364 1004 aa21.29■■□□□ 1
TPM4-201ENST00000300933 BNIP2Q12982 314 aa21.29■■□□□ 1
TPM4-201ENST00000300933 INPP5AQ14642 412 aa21.29■■□□□ 1
TPM4-201ENST00000300933 ZNF284Q2VY69 593 aa21.29■■□□□ 1
TPM4-201ENST00000300933 FAM78AQ5JUQ0 283 aa21.29■■□□□ 1
TPM4-201ENST00000300933 TRIM46Q7Z4K8 759 aa21.29■■□□□ 1
TPM4-201ENST00000300933 OR10A6Q8NH74 314 aa21.29■■□□□ 1
TPM4-201ENST00000300933 MCOLN3Q8TDD5 553 aa21.29■■□□□ 1
TPM4-201ENST00000300933 SLC13A3Q8WWT9 602 aa21.29■■□□□ 1
TPM4-201ENST00000300933 BIRC7Q96CA5 298 aa21.29■■□□□ 1
TPM4-201ENST00000300933 MTERF1Q99551 399 aaKnown RBP21.29■■□□□ 1
TPM4-201ENST00000300933 C9orf16Q9BUW7 83 aa21.29■■□□□ 1
TPM4-201ENST00000300933 C1orf109Q9NX04 203 aa21.29■■□□□ 1
TPM4-201ENST00000300933 ARHGEF33A8MVX0 844 aa21.29■■□□□ 1
TPM4-201ENST00000300933 SLC28A1O00337 649 aa21.29■■□□□ 1
TPM4-201ENST00000300933 SULT1C4O75897 302 aa21.29■■□□□ 1
TPM4-201ENST00000300933 SNAP29O95721 258 aa21.29■■□□□ 1
TPM4-201ENST00000300933 ST8SIA6P61647 398 aa21.29■■□□□ 1
TPM4-201ENST00000300933 FOXM1Q08050 763 aa21.29■■□□□ 1
TPM4-201ENST00000300933 CHIT1Q13231 466 aa21.29■■□□□ 1
TPM4-201ENST00000300933 MAPKAPK3Q16644 382 aa21.29■■□□□ 1
TPM4-201ENST00000300933 FNDC3BQ53EP0 1204 aaKnown RBP21.29■■□□□ 1
TPM4-201ENST00000300933 GLYATQ6IB77 296 aa21.29■■□□□ 1
TPM4-201ENST00000300933 TMEM220Q6QAJ8 160 aa21.29■■□□□ 1
TPM4-201ENST00000300933 DTWD1Q8N5C7 304 aa21.29■■□□□ 1
TPM4-201ENST00000300933 DHRSXQ8N5I4 330 aa21.29■■□□□ 1
TPM4-201ENST00000300933 BTN2A2Q8WVV5 523 aa21.29■■□□□ 1
TPM4-201ENST00000300933 GTF2H4Q92759 462 aa21.29■■□□□ 1
TPM4-201ENST00000300933 USP7Q93009 1102 aa21.29■■□□□ 1
TPM4-201ENST00000300933 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.29■■□□□ 1
TPM4-201ENST00000300933 SOBPA7XYQ1 873 aa21.28■■□□□ 1
TPM4-201ENST00000300933 GFYI3L273 518 aa21.28■■□□□ 1
TPM4-201ENST00000300933 PGRP06401 933 aa21.28■■□□□ 1
TPM4-201ENST00000300933 NR4A1P22736 598 aa21.28■■□□□ 1
TPM4-201ENST00000300933 JAK1P23458 1154 aa21.28■■□□□ 1
TPM4-201ENST00000300933 PFN3P60673 137 aa21.28■■□□□ 1
TPM4-201ENST00000300933 TMEM115Q12893 351 aaPredicted RBP21.28■■□□□ 1
TPM4-201ENST00000300933 GBX1Q14549 363 aa21.28■■□□□ 1
TPM4-201ENST00000300933 SYTL3Q4VX76 610 aa21.28■■□□□ 1
TPM4-201ENST00000300933 NIPAL1Q6NVV3 410 aa21.28■■□□□ 1
TPM4-201ENST00000300933 CELF5Q8N6W0 485 aaKnown RBP21.28■■□□□ 1
TPM4-201ENST00000300933 PACRGLQ8N7B6 248 aa21.28■■□□□ 1
TPM4-201ENST00000300933 VN1R2Q8NFZ6 395 aa21.28■■□□□ 1
TPM4-201ENST00000300933 CDC26Q8NHZ8 85 aa21.28■■□□□ 1
TPM4-201ENST00000300933 ASZ1Q8WWH4 475 aa21.28■■□□□ 1
TPM4-201ENST00000300933 APOLD1Q96LR9 279 aa21.28■■□□□ 1
TPM4-201ENST00000300933 RNF145Q96MT1 663 aa21.28■■□□□ 1
TPM4-201ENST00000300933 FANCEQ9HB96 536 aa21.28■■□□□ 1
TPM4-201ENST00000300933 HPS4Q9NQG7 708 aa21.28■■□□□ 1
TPM4-201ENST00000300933 AQP12BA6NM10 295 aa21.28■■□□□ 1
TPM4-201ENST00000300933 KRT6AP02538 564 aa21.28■■□□□ 1
TPM4-201ENST00000300933 KRT6BP04259 564 aa21.28■■□□□ 1
TPM4-201ENST00000300933 C8GP07360 202 aa21.28■■□□□ 1
TPM4-201ENST00000300933 ENO2P09104 434 aaPredicted RBP21.28■■□□□ 1
TPM4-201ENST00000300933 NFKBIAP25963 317 aa21.28■■□□□ 1
TPM4-201ENST00000300933 ELK4P28324 431 aa21.28■■□□□ 1
TPM4-201ENST00000300933 TTKP33981 857 aa21.28■■□□□ 1
TPM4-201ENST00000300933 MMP12P39900 470 aa21.28■■□□□ 1
TPM4-201ENST00000300933 KRT6CP48668 564 aa21.28■■□□□ 1
TPM4-201ENST00000300933 MRPL19P49406 292 aaKnown RBP21.28■■□□□ 1
TPM4-201ENST00000300933 CCT8P50990 548 aa21.28■■□□□ 1
TPM4-201ENST00000300933 MLLT10P55197 1068 aa21.28■■□□□ 1
TPM4-201ENST00000300933 RAB15P59190 212 aa21.28■■□□□ 1
TPM4-201ENST00000300933 CACHD1Q5VU97 1274 aa21.28■■□□□ 1
TPM4-201ENST00000300933 TECPR1Q7Z6L1 1165 aa21.28■■□□□ 1
TPM4-201ENST00000300933 AQP12AQ8IXF9 295 aa21.28■■□□□ 1
TPM4-201ENST00000300933 C10orf111Q8N326 155 aa21.28■■□□□ 1
TPM4-201ENST00000300933 GLYATL1Q969I3 302 aa21.28■■□□□ 1
TPM4-201ENST00000300933 OR52E6Q96RD3 313 aa21.28■■□□□ 1
TPM4-201ENST00000300933 ZBTB18Q99592 522 aa21.28■■□□□ 1
TPM4-201ENST00000300933 SLC25A37Q9NYZ2 338 aa21.28■■□□□ 1
TPM4-201ENST00000300933 MARK1Q9P0L2 795 aa21.28■■□□□ 1
TPM4-201ENST00000300933 PRKAB1Q9Y478 270 aa21.28■■□□□ 1
TPM4-201ENST00000300933 TCRBV5S2A0A599 114 aa21.27■■□□□ 1
TPM4-201ENST00000300933 TRIM64A6NGJ6 449 aa21.27■■□□□ 1
TPM4-201ENST00000300933 IFRD1O00458 451 aaPredicted RBP21.27■■□□□ 1
TPM4-201ENST00000300933 ACOX3O15254 700 aa21.27■■□□□ 1
TPM4-201ENST00000300933 BCL10O95999 233 aa21.27■■□□□ 1
TPM4-201ENST00000300933 HNRNPA1P09651 372 aaKnown RBP eCLIP21.27■■□□□ 1
TPM4-201ENST00000300933 CD22P20273 847 aa21.27■■□□□ 1
TPM4-201ENST00000300933 EFNA1P20827 205 aaPredicted RBP21.27■■□□□ 1
TPM4-201ENST00000300933 NAE1Q13564 534 aa21.27■■□□□ 1
TPM4-201ENST00000300933 ATP6AP1Q15904 470 aa21.27■■□□□ 1
TPM4-201ENST00000300933 PGS1Q32NB8 556 aa21.27■■□□□ 1
TPM4-201ENST00000300933 PSRC1Q6PGN9 363 aaPredicted RBP21.27■■□□□ 1
TPM4-201ENST00000300933 FAM86B1Q8N7N1 296 aa21.27■■□□□ 1
TPM4-201ENST00000300933 FIG4Q92562 907 aa21.27■■□□□ 1
TPM4-201ENST00000300933 CENPNQ96H22 339 aaPredicted RBP21.27■■□□□ 1
TPM4-201ENST00000300933 TRIM15Q9C019 465 aa21.27■■□□□ 1
TPM4-201ENST00000300933 MMP20O60882 483 aa21.27■■□□□ 1
TPM4-201ENST00000300933 CYP2A7P20853 494 aa21.27■■□□□ 1
TPM4-201ENST00000300933 SLC6A12P48065 614 aa21.27■■□□□ 1
TPM4-201ENST00000300933 ZIK1Q3SY52 487 aaPredicted RBP21.27■■□□□ 1
TPM4-201ENST00000300933 USP39Q53GS9 565 aaKnown RBP21.27■■□□□ 1
TPM4-201ENST00000300933 CCDC92Q53HC0 331 aaPredicted RBP21.27■■□□□ 1
TPM4-201ENST00000300933 CYBRD1Q53TN4 286 aa21.27■■□□□ 1
TPM4-201ENST00000300933 ZDHHC20Q5W0Z9 365 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms