RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 FAM129CQ86XR2 697 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 TMEM126BQ8IUX1 230 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 OR5K1Q8NHB7 308 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 EEF1AKMT1Q8WVE0 214 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 ANKRD49Q8WVL7 239 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 C12orf66Q96MD2 445 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 SAMD11Q96NU1 681 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 KCTD5Q9NXV2 234 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 DKK3Q9UBP4 350 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 CA14Q9ULX7 337 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 GSTK1Q9Y2Q3 226 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 MTX2O75431 263 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 CNTN5O94779 1100 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 CSF2P04141 144 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 NCS1P62166 190 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 IL10RBQ08334 325 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 TECRLQ5HYJ1 363 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 EOGTQ5NDL2 527 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 TPRG1LQ5T0D9 272 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 ZDHHC20Q5W0Z9 365 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 STEAP4Q687X5 459 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 ZNF420Q8TAQ5 688 aaPredicted RBP13.11□□□□□ -0.31
HPS3-201ENST00000296051 PIGKQ92643 395 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 PRRG4Q9BZD6 226 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 SUV39H2Q9H5I1 410 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 TLR6Q9Y2C9 796 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 ZNF451Q9Y4E5 1061 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 MAP4K5Q9Y4K4 846 aa13.11□□□□□ -0.31
HPS3-201ENST00000296051 LAMTOR5O43504 91 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 IL6P05231 212 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 ACVRL1P37023 503 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 MASP1P48740 699 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 CLK3P49761 638 aaKnown RBP13.1□□□□□ -0.31
HPS3-201ENST00000296051 GALNT2Q10471 571 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 RBM48Q5RL73 367 aaKnown RBP13.1□□□□□ -0.31
HPS3-201ENST00000296051 CILP2Q8IUL8 1156 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 BRSK1Q8TDC3 778 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 SMOQ99835 787 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 AIF1LQ9BQI0 150 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 LHPPQ9H008 270 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 WDR26Q9H7D7 661 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 DZANK1Q9NVP4 752 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 OSER1Q9NX31 292 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 TMEM9Q9P0T7 183 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 ERVK-18Q9QC07 812 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 BTN3A3O00478 584 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 TCF3P15923 654 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 PSMA1P25786 263 aaKnown RBP13.1□□□□□ -0.31
HPS3-201ENST00000296051 RPIAP49247 311 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 ARSDP51689 593 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 SH3BP2P78314 561 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 LPAL2Q16609 132 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 ABHD11Q8NFV4 315 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 NTAN1Q96AB6 310 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 SRMSQ9H3Y6 488 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 C11orf16Q9NQ32 467 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 C14orf119Q9NWQ9 140 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 PCDHGA4Q9Y5G9 962 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 NUP98P52948 1817 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 TIAM2Q8IVF5 1701 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 SAGE2PA6NJ88 616 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 UPK3BL1B0FP48 263 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 UPK3BL2E5RIL1 263 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 PITPNM1O00562 1244 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 CASKO14936 926 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 TIMP1P01033 207 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 HAPLN1P10915 354 aaPredicted RBP13.1□□□□□ -0.31
HPS3-201ENST00000296051 PAICSP22234 425 aaKnown RBP13.1□□□□□ -0.31
HPS3-201ENST00000296051 TM4SF4P48230 202 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 RAB15P59190 212 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 RPS14P62263 151 aaKnown RBP13.1□□□□□ -0.31
HPS3-201ENST00000296051 SRSF11Q05519 484 aaKnown RBP13.1□□□□□ -0.31
HPS3-201ENST00000296051 RFTN1Q14699 578 aaPredicted RBP13.1□□□□□ -0.31
HPS3-201ENST00000296051 GPAT3Q53EU6 434 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 UNC50Q53HI1 259 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 SERPINA9Q86WD7 417 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 ZCCHC10Q8TBK6 192 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 LRCH3Q96II8 777 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 MCMBPQ9BTE3 642 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 AP3M1Q9Y2T2 418 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 HMX2A2RU54 273 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 MEIS3P2A8K0S8 358 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 CHRNA1P02708 482 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 NR2F1P10589 423 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 PSMA3P25788 255 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 ABATP80404 500 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 GHRHRQ02643 423 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 GANABQ14697 944 aaKnown RBP13.1□□□□□ -0.31
HPS3-201ENST00000296051 PHF19Q5T6S3 580 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 C9orf64Q5T6V5 341 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 SMYD5Q6GMV2 418 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 FGD2Q7Z6J4 655 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 ADGRG2Q8IZP9 1017 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 PPP1R14AQ96A00 147 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 MS4A4AQ96JQ5 239 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 PAAF1Q9BRP4 392 aa13.1□□□□□ -0.31
HPS3-201ENST00000296051 WNT9AO14904 365 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 PRSS56P0CW18 603 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 MAGEA10P43363 369 aaPredicted RBP13.09□□□□□ -0.31
HPS3-201ENST00000296051 ATP12AP54707 1039 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms