RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 KDM1AO60341 852 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 RPS17P08708 135 aaKnown RBP14.62□□□□□ -0.07
CCDC140-201ENST00000295226 NPPBP16860 134 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 EPORP19235 508 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 ARRB2P32121 409 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 HSD17B2P37059 387 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 CCL7P80098 99 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 CFHR1Q03591 330 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 GTF2H2Q13888 395 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 INAVAQ3KP66 663 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 CCDC157Q569K6 752 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 CFAP157Q5JU67 520 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 SPDYAQ5MJ70 313 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 CAPN13Q6MZZ7 669 aaPredicted RBP14.62□□□□□ -0.07
CCDC140-201ENST00000295226 GTF2H2CQ6P1K8 395 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 GOLGA7Q7Z5G4 137 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 TRPC4APQ8TEL6 797 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 PPP4R1Q8TF05 950 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 UBTD2Q8WUN7 234 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 NCSTNQ92542 709 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 CCDC126Q96EE4 140 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 L3HYPDHQ96EM0 354 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 CCDC3Q9BQI4 270 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 RAB11FIP5Q9BXF6 653 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 KLHL25Q9H0H3 589 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 GSTO2Q9H4Y5 243 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 SLC32A1Q9H598 525 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 ZBTB26Q9HCK0 441 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 ACTR10Q9NZ32 417 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 FTSJ1Q9UET6 329 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 USH1CQ9Y6N9 552 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 OR5K3A6NET4 321 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 K7EPI3 171 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 KLF11O14901 512 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 PRICKLE3O43900 615 aaPredicted RBP14.61□□□□□ -0.07
CCDC140-201ENST00000295226 CBFA2T3O75081 653 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 LYPLA1O75608 230 aaPredicted RBP14.61□□□□□ -0.07
CCDC140-201ENST00000295226 DCTN3O75935 186 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 TROVE2P10155 538 aaKnown RBP eCLIP14.61□□□□□ -0.07
CCDC140-201ENST00000295226 MPSTP25325 297 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 SPRED1Q7Z699 444 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 OR2A1Q8NGT9 310 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 FLVCR1-AS1Q8TAF5 88 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 HMGCLL1Q8TB92 370 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 RAB3IL1Q8TBN0 382 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 ZNF483Q8TF39 744 aaPredicted RBP14.61□□□□□ -0.07
CCDC140-201ENST00000295226 PRR11Q96HE9 360 aaPredicted RBP14.61□□□□□ -0.07
CCDC140-201ENST00000295226 AHCYL2Q96HN2 611 aaKnown RBP14.61□□□□□ -0.07
CCDC140-201ENST00000295226 CDK15Q96Q40 435 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 OR2A14Q96R47 310 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 C20orf27Q9GZN8 174 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 SYNDIG1Q9H7V2 258 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 NOL11Q9H8H0 719 aaKnown RBP14.61□□□□□ -0.07
CCDC140-201ENST00000295226 DNAJC11Q9NVH1 559 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 ATXN7L1Q9ULK2 861 aaPredicted RBP14.61□□□□□ -0.07
CCDC140-201ENST00000295226 ANGPTL3Q9Y5C1 460 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 TNPO3Q9Y5L0 923 aaKnown RBP14.61□□□□□ -0.07
CCDC140-201ENST00000295226 PCNX2A6NKB5 2137 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 ZNF839A8K0R7 811 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 UBFD1O14562 309 aaKnown RBP14.61□□□□□ -0.07
CCDC140-201ENST00000295226 GFRA3O60609 400 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 PRAMEF4O60810 478 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 ATP5HO75947 161 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 CHRNGP07510 517 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 UGT2B7P16662 529 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 CKMT2P17540 419 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 CD1CP29017 333 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 PRDX3P30048 256 aaKnown RBP14.61□□□□□ -0.07
CCDC140-201ENST00000295226 GPR3P46089 330 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 LSSP48449 732 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 GFERP55789 205 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 CLCQ05315 142 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 SF1Q15637 639 aaKnown RBP14.61□□□□□ -0.07
CCDC140-201ENST00000295226 GALNTL6Q49A17 601 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 PRAMEF9Q5VWM5 478 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 PRAMEF13Q5VWM6 474 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 IRGCQ6NXR0 463 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 OOSP2Q86WS3 158 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 OR52B6Q8NGF0 335 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 OR6Y1Q8NGX8 325 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 NEIL2Q969S2 332 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 MANSC1Q9H8J5 431 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 IPPKQ9H8X2 491 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 CUEDC1Q9NWM3 386 aaPredicted RBP14.61□□□□□ -0.07
CCDC140-201ENST00000295226 TMEM9Q9P0T7 183 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 KLHL3Q9UH77 587 aa14.61□□□□□ -0.07
CCDC140-201ENST00000295226 A0A1W2PQM1 296 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 E7EQ34 232 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 OR7A17O14581 309 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 KIF1CO43896 1103 aaKnown RBP14.6□□□□□ -0.07
CCDC140-201ENST00000295226 NRP2O60462 931 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 PRAMEF10O60809 474 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 KATNA1O75449 491 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 TGDSO95455 350 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 SERPINE1P05121 402 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 HOXB3P14651 431 aaPredicted RBP14.6□□□□□ -0.07
CCDC140-201ENST00000295226 PVRP15151 417 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 CSF2RBP32927 897 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 BST1Q10588 318 aa14.6□□□□□ -0.07
CCDC140-201ENST00000295226 CDC16Q13042 620 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms