RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 TSPYL1Q9H0U9 437 aa24.13■■□□□ 1.45
PDF-201ENST00000288022 CAB39LQ9H9S4 337 aa24.13■■□□□ 1.45
PDF-201ENST00000288022 SLC6A20Q9NP91 592 aa24.13■■□□□ 1.45
PDF-201ENST00000288022 PCMTD2Q9NV79 361 aa24.13■■□□□ 1.45
PDF-201ENST00000288022 ARL15Q9NXU5 204 aa24.13■■□□□ 1.45
PDF-201ENST00000288022 CFAP47Q6ZTR5 3102 aa24.13■■□□□ 1.45
PDF-201ENST00000288022 C21orf140B9A014 251 aa24.12■■□□□ 1.45
PDF-201ENST00000288022 NKX2-8O15522 239 aa24.12■■□□□ 1.45
PDF-201ENST00000288022 NRP2O60462 931 aa24.12■■□□□ 1.45
PDF-201ENST00000288022 CTSVO60911 334 aa24.12■■□□□ 1.45
PDF-201ENST00000288022 C1QAP02745 245 aa24.12■■□□□ 1.45
PDF-201ENST00000288022 ATXN8OSP0DMR3 200 aa24.12■■□□□ 1.45
PDF-201ENST00000288022 PHBP35232 272 aa24.12■■□□□ 1.45
PDF-201ENST00000288022 SPRP35270 261 aaPredicted RBP24.12■■□□□ 1.45
PDF-201ENST00000288022 RORAP35398 523 aa24.12■■□□□ 1.45
PDF-201ENST00000288022 TBPL1P62380 186 aa24.12■■□□□ 1.45
PDF-201ENST00000288022 RPS15P62841 145 aaKnown RBP24.12■■□□□ 1.45
PDF-201ENST00000288022 MC1RQ01726 317 aa24.12■■□□□ 1.45
PDF-201ENST00000288022 PRDX1Q06830 199 aaKnown RBP24.12■■□□□ 1.45
PDF-201ENST00000288022 COL9A2Q14055 689 aaPredicted RBP24.12■■□□□ 1.45
PDF-201ENST00000288022 EFTUD2Q15029 972 aaKnown RBP eCLIP24.12■■□□□ 1.459e-8■□□□□ 9.2
PDF-201ENST00000288022 PTCHD3Q3KNS1 767 aa24.12■■□□□ 1.45
PDF-201ENST00000288022 GRTP1Q5TC63 336 aa24.12■■□□□ 1.45
PDF-201ENST00000288022 C16orf46Q6P387 395 aa24.12■■□□□ 1.45
PDF-201ENST00000288022 AGTRAPQ6RW13 159 aa24.12■■□□□ 1.45
PDF-201ENST00000288022 LRRC56Q8IYG6 542 aaPredicted RBP24.12■■□□□ 1.45
PDF-201ENST00000288022 PDLIM5Q96HC4 596 aaKnown RBP24.12■■□□□ 1.45
PDF-201ENST00000288022 NDC1Q9BTX1 674 aa24.12■■□□□ 1.45
PDF-201ENST00000288022 ATG10Q9H0Y0 220 aa24.12■■□□□ 1.45
PDF-201ENST00000288022 CHST8Q9H2A9 424 aa24.12■■□□□ 1.45
PDF-201ENST00000288022 POPDC3Q9HBV1 291 aa24.12■■□□□ 1.45
PDF-201ENST00000288022 TXLNGQ9NUQ3 528 aa24.12■■□□□ 1.45
PDF-201ENST00000288022 SRPK3Q9UPE1 567 aa24.12■■□□□ 1.45
PDF-201ENST00000288022 KLK4Q9Y5K2 254 aa24.12■■□□□ 1.45
PDF-201ENST00000288022 A0A0J9YVX5 310 aa24.11■■□□□ 1.45
PDF-201ENST00000288022 H3BMH7 237 aa24.11■■□□□ 1.45
PDF-201ENST00000288022 ERVH48-1M5A8F1 160 aa24.11■■□□□ 1.45
PDF-201ENST00000288022 TERTO14746 1132 aaKnown RBP24.11■■□□□ 1.45
PDF-201ENST00000288022 FAM155BO75949 473 aa24.11■■□□□ 1.45
PDF-201ENST00000288022 AGXTP21549 392 aa24.11■■□□□ 1.45
PDF-201ENST00000288022 ABATP80404 500 aa24.11■■□□□ 1.45
PDF-201ENST00000288022 NAB1Q13506 487 aa24.11■■□□□ 1.45
PDF-201ENST00000288022 C1orf189Q5VU69 101 aa24.11■■□□□ 1.45
PDF-201ENST00000288022 ADCK2Q7Z695 626 aa24.11■■□□□ 1.45
PDF-201ENST00000288022 RUFY1Q96T51 708 aa24.11■■□□□ 1.45
PDF-201ENST00000288022 GPR22Q99680 433 aa24.11■■□□□ 1.45
PDF-201ENST00000288022 UTP6Q9NYH9 597 aaKnown RBP24.11■■□□□ 1.45
PDF-201ENST00000288022 NINJ2Q9NZG7 142 aa24.11■■□□□ 1.45
PDF-201ENST00000288022 ANKMY1Q9P2S6 941 aa24.11■■□□□ 1.45
PDF-201ENST00000288022 IKZF3Q9UKT9 509 aa24.11■■□□□ 1.45
PDF-201ENST00000288022 OR2A25A4D2G3 310 aa24.1■■□□□ 1.45
PDF-201ENST00000288022 NPEPPSL1A6NEC2 478 aa24.1■■□□□ 1.45
PDF-201ENST00000288022 GUCA1CO95843 209 aa24.1■■□□□ 1.45
PDF-201ENST00000288022 ENO2P09104 434 aaPredicted RBP24.1■■□□□ 1.45
PDF-201ENST00000288022 STMN1P16949 149 aa24.1■■□□□ 1.45
PDF-201ENST00000288022 AP1S2P56377 157 aa24.1■■□□□ 1.45
PDF-201ENST00000288022 VSX2P58304 361 aaPredicted RBP24.1■■□□□ 1.45
PDF-201ENST00000288022 CDC20Q12834 499 aa24.1■■□□□ 1.45
PDF-201ENST00000288022 NAE1Q13564 534 aa24.1■■□□□ 1.45
PDF-201ENST00000288022 TCTE1Q5JU00 501 aa24.1■■□□□ 1.45
PDF-201ENST00000288022 PRAMEF13Q5VWM6 474 aa24.1■■□□□ 1.45
PDF-201ENST00000288022 LCN10Q6JVE6 187 aa24.1■■□□□ 1.45
PDF-201ENST00000288022 ANKRD49Q8WVL7 239 aa24.1■■□□□ 1.45
PDF-201ENST00000288022 MRRFQ96E11 262 aaKnown RBP24.1■■□□□ 1.45
PDF-201ENST00000288022 PLCD4Q9BRC7 762 aa24.1■■□□□ 1.45
PDF-201ENST00000288022 GPR87Q9BY21 358 aa24.1■■□□□ 1.45
PDF-201ENST00000288022 ACTL8Q9H568 366 aa24.1■■□□□ 1.45
PDF-201ENST00000288022 STARD5Q9NSY2 213 aa24.1■■□□□ 1.45
PDF-201ENST00000288022 DHCR7Q9UBM7 475 aaKnown RBP24.1■■□□□ 1.45
PDF-201ENST00000288022 SNX7Q9UNH6 387 aa24.1■■□□□ 1.45
PDF-201ENST00000288022 PCDHGA6Q9Y5G7 932 aa24.1■■□□□ 1.45
PDF-201ENST00000288022 CDC7O00311 574 aa24.09■■□□□ 1.45
PDF-201ENST00000288022 PHGDHO43175 533 aaKnown RBP24.09■■□□□ 1.45
PDF-201ENST00000288022 RHOXF2BP0C7M4 288 aa24.09■■□□□ 1.45
PDF-201ENST00000288022 SLMAPQ14BN4 828 aa24.09■■□□□ 1.45
PDF-201ENST00000288022 FRMPD2BQ6IN97 320 aa24.09■■□□□ 1.45
PDF-201ENST00000288022 RHBDD2Q6NTF9 364 aa24.09■■□□□ 1.45
PDF-201ENST00000288022 ZNF517Q6ZMY9 492 aaPredicted RBP24.09■■□□□ 1.45
PDF-201ENST00000288022 RNF44Q7L0R7 432 aa24.09■■□□□ 1.45
PDF-201ENST00000288022 TTC29Q8NA56 475 aaPredicted RBP24.09■■□□□ 1.45
PDF-201ENST00000288022 TTC9Q92623 222 aa24.09■■□□□ 1.45
PDF-201ENST00000288022 EXTL1Q92935 676 aa24.09■■□□□ 1.45
PDF-201ENST00000288022 ZFYVE21Q9BQ24 234 aa24.09■■□□□ 1.45
PDF-201ENST00000288022 DPH2Q9BQC3 489 aaPredicted RBP24.09■■□□□ 1.45
PDF-201ENST00000288022 RHOXF2Q9BQY4 288 aa24.09■■□□□ 1.45
PDF-201ENST00000288022 ARHGAP9Q9BRR9 750 aa24.09■■□□□ 1.45
PDF-201ENST00000288022 PCBD2Q9H0N5 130 aa24.09■■□□□ 1.45
PDF-201ENST00000288022 CTNNAL1Q9UBT7 734 aa24.09■■□□□ 1.45
PDF-201ENST00000288022 PCM1Q15154 2024 aa24.09■■□□□ 1.45
PDF-201ENST00000288022 NBEAQ8NFP9 2946 aa24.08■■□□□ 1.45
PDF-201ENST00000288022 IGKV1-8A0A0C4DH67 115 aa24.08■■□□□ 1.45
PDF-201ENST00000288022 C9J4A7 227 aa24.08■■□□□ 1.45
PDF-201ENST00000288022 ATXN7O15265 892 aaPredicted RBP24.08■■□□□ 1.45
PDF-201ENST00000288022 SRPX2O60687 465 aaPredicted RBP24.08■■□□□ 1.45
PDF-201ENST00000288022 CREG1O75629 220 aa24.08■■□□□ 1.45
PDF-201ENST00000288022 ITGB2P05107 769 aa24.08■■□□□ 1.45
PDF-201ENST00000288022 EIF2S1P05198 315 aaKnown RBP24.08■■□□□ 1.45
PDF-201ENST00000288022 ALAS2P22557 587 aa24.08■■□□□ 1.45
PDF-201ENST00000288022 CCND1P24385 295 aa24.08■■□□□ 1.45
PDF-201ENST00000288022 PTPN4P29074 926 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms