RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 SLX1AQ9BQ83 275 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 FERMT1Q9BQL6 677 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 TRIM56Q9BRZ2 755 aaKnown RBP8.55□□□□□ -1.04
TPM3-201ENST00000271850 ANP32EQ9BTT0 268 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 CARD6Q9BX69 1037 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 RBSNQ9H1K0 784 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 LUC7LQ9NQ29 371 aaKnown RBP8.55□□□□□ -1.04
TPM3-201ENST00000271850 GALPQ9UBC7 116 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 CDC23Q9UJX2 597 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 AMFRQ9UKV5 643 aa8.55□□□□□ -1.04
TPM3-201ENST00000271850 G3BP2Q9UN86 482 aaKnown RBP8.55□□□□□ -1.04
TPM3-201ENST00000271850 DCHS2Q6V1P9 2916 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 IGLV3-12A0A075B6K2 115 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 OR2A25A4D2G3 310 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 FFAR3O14843 346 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 GPR42O15529 346 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 IPO13O94829 963 aaKnown RBP8.54□□□□□ -1.04
TPM3-201ENST00000271850 ALPPP05187 535 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 ERGP11308 486 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 COX6A1P12074 109 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 NMBRP28336 390 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 SOX11P35716 441 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 VSX2P58304 361 aaPredicted RBP8.54□□□□□ -1.04
TPM3-201ENST00000271850 PLOD1Q02809 727 aaPredicted RBP8.54□□□□□ -1.04
TPM3-201ENST00000271850 KLC1Q07866 573 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 PRTGQ2VWP7 1150 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 VWA2Q5GFL6 755 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 WASHC2DQ5SRD0 308 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 ATG9BQ674R7 924 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 FBXO42Q6P3S6 717 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 ZNF449Q6P9G9 518 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 LINC00523Q86TU6 105 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 DNAAF3Q8N9W5 541 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 OR2L3Q8NG85 312 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 OR6P1Q8NGX9 317 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 HMGCLL1Q8TB92 370 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 STT3BQ8TCJ2 826 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 DLG3Q92796 817 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 NACC2Q96BF6 587 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 MRFAP1L1Q96HT8 127 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 CALR3Q96L12 384 aaKnown RBP8.54□□□□□ -1.04
TPM3-201ENST00000271850 MIPEPQ99797 713 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 SELENOSQ9BQE4 189 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 IRAK4Q9NWZ3 460 aa8.54□□□□□ -1.04
TPM3-201ENST00000271850 CPAMD8Q8IZJ3 1885 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 ADGRG4Q8IZF6 3080 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 A0A0J9YVX5 310 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 A0A1W2PQ72 361 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 TCRBV7S3A2A0A539 114 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 ERI2A8K979 691 aaKnown RBP8.53□□□□□ -1.04
TPM3-201ENST00000271850 MIF4GDA9UHW6 222 aaKnown RBP8.53□□□□□ -1.04
TPM3-201ENST00000271850 PRMT5O14744 637 aaPredicted RBP8.53□□□□□ -1.04
TPM3-201ENST00000271850 PSMD3O43242 534 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 LRRTM2O43300 516 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 ZG16O60844 167 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 IFNB1P01574 187 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 IGHEP01854 428 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 ZGLP1P0C6A0 271 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 PTMSP20962 102 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 RPS3P23396 243 aaKnown RBP eCLIP8.53□□□□□ -1.04
TPM3-201ENST00000271850 GRNP28799 593 aaKnown RBP8.53□□□□□ -1.04
TPM3-201ENST00000271850 RPL22P35268 128 aaKnown RBP8.53□□□□□ -1.04
TPM3-201ENST00000271850 FDFT1P37268 417 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 ARSFP54793 590 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 GRM7Q14831 915 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 ZNF169Q14929 603 aaPredicted RBP8.53□□□□□ -1.04
TPM3-201ENST00000271850 SF1Q15637 639 aaKnown RBP8.53□□□□□ -1.04
TPM3-201ENST00000271850 SKOR2Q2VWA4 1001 aaPredicted RBP8.53□□□□□ -1.04
TPM3-201ENST00000271850 TUBB8Q3ZCM7 444 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 FASTKD1Q53R41 847 aaKnown RBP8.53□□□□□ -1.04
TPM3-201ENST00000271850 RNFT1Q5M7Z0 435 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 AGAP7PQ5VUJ5 663 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 CES3Q6UWW8 571 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 LINC00696Q6ZRV3 163 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 GAS2L3Q86XJ1 694 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 SLC13A5Q86YT5 568 aaPredicted RBP8.53□□□□□ -1.04
TPM3-201ENST00000271850 PRSS58Q8IYP2 241 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 AMER3Q8N944 861 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 DNAJB14Q8TBM8 379 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 FAR1Q8WVX9 515 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 ASZ1Q8WWH4 475 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 LPGAT1Q92604 370 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 MFSD3Q96ES6 412 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 THOC3Q96J01 351 aaKnown RBP8.53□□□□□ -1.04
TPM3-201ENST00000271850 CNDP1Q96KN2 507 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 AGAP4Q96P64 663 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 SLC30A3Q99726 388 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 LHPPQ9H008 270 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 ZNF160Q9HCG1 818 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 RAB6BQ9NRW1 208 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 CATSPERZQ9NTU4 200 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 PLA2G3Q9NZ20 509 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 OSGIN2Q9Y236 505 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 MED16Q9Y2X0 877 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 MRPS2Q9Y399 296 aaKnown RBP8.53□□□□□ -1.04
TPM3-201ENST00000271850 HEATR5BQ9P2D3 2071 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 CELSR1Q9NYQ6 3014 aa8.53□□□□□ -1.04
TPM3-201ENST00000271850 ZFHX3Q15911 3703 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 HYKKA2RU49 373 aa8.52□□□□□ -1.05
TPM3-201ENST00000271850 GOLGA6L9A6NEM1 432 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms