RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 PFN3P60673 137 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 ABRQ12979 859 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 NEDD8Q15843 81 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 ARSIQ5FYB1 569 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 LY6G5CQ5SRR4 150 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 FRG2Q64ET8 278 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 TMEM215Q68D42 235 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 SPESP1Q6UW49 350 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 KCTD8Q6ZWB6 473 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 GPR65Q8IYL9 337 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 NETO1Q8TDF5 533 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 NELL1Q92832 810 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 FOXJ1Q92949 421 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 FRG2BQ96QU4 278 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 MBOAT4Q96T53 435 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 RIOK2Q9BVS4 552 aaKnown RBP12.52□□□□□ -0.41
CPSF6-201ENST00000266679 ING2Q9H160 280 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 LTB4R2Q9NPC1 389 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 AP3M1Q9Y2T2 418 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 HIDE1A8MVS5 230 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 FADS2P1A8MWK0 482 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 UPK3BL1B0FP48 263 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 WASH3PC4AMC7 463 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 UPK3BL2E5RIL1 263 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 B4GAT1O43505 415 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 C1QCP02747 245 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 ZNF30P17039 623 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 HOXB9P17482 250 aaPredicted RBP12.52□□□□□ -0.41
CPSF6-201ENST00000266679 POU3F3P20264 500 aaPredicted RBP12.52□□□□□ -0.41
CPSF6-201ENST00000266679 PRPH2P23942 346 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 TPD52P55327 224 aaPredicted RBP12.52□□□□□ -0.41
CPSF6-201ENST00000266679 IRF8Q02556 426 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 SLC14A1Q13336 389 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 DDX39BQ13838 428 aaKnown RBP12.52□□□□□ -0.41
CPSF6-201ENST00000266679 RAB39AQ14964 217 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 SYTL3Q4VX76 610 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 NOXRED1Q6NXP6 359 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 BRAT1Q6PJG6 821 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 DOK6Q6PKX4 331 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 ADAMTS16Q8TE57 1224 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 DTNBP1Q96EV8 351 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 TCF25Q9BQ70 676 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 HEPHQ9BQS7 1158 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 OSBPL6Q9BZF3 934 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 PRM3Q9NNZ6 103 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 SPHK2Q9NRA0 654 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 DCAF13Q9NV06 445 aaKnown RBP12.52□□□□□ -0.41
CPSF6-201ENST00000266679 WNT6Q9Y6F9 365 aa12.52□□□□□ -0.41
CPSF6-201ENST00000266679 A0A1W2PQ67 120 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 ARHGEF33A8MVX0 844 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 RFXANKO14593 260 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 PER2O15055 1255 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 MOSPD3O75425 235 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 FTH1P02794 183 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 RETP07949 1114 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 CDK4P11802 303 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 JUPP14923 745 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 IL7RP16871 459 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 PFKLP17858 780 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 POLR2EP19388 210 aaKnown RBP12.51□□□□□ -0.41
CPSF6-201ENST00000266679 CD22P20273 847 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 EEF1B2P24534 225 aaKnown RBP12.51□□□□□ -0.41
CPSF6-201ENST00000266679 PTPN6P29350 595 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 PBLDP30039 288 aaPredicted RBP12.51□□□□□ -0.41
CPSF6-201ENST00000266679 WEE1P30291 646 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 BDKRB1P46663 353 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 PREPP48147 710 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 HLCSP50747 726 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 AP1S2P56377 157 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 VAC14Q08AM6 782 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 SF1Q15637 639 aaKnown RBP12.51□□□□□ -0.41
CPSF6-201ENST00000266679 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.51□□□□□ -0.41
CPSF6-201ENST00000266679 ELMSAN1Q6PJG2 1045 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 TMEM179BQ7Z7N9 219 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 GPR180Q86V85 440 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 SYT12Q8IV01 421 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 RAVER1Q8IY67 606 aaKnown RBP12.51□□□□□ -0.41
CPSF6-201ENST00000266679 OR7A2PQ8NGA2 310 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 DNAJB8Q8NHS0 232 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 TESCQ96BS2 214 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 C12orf43Q96C57 262 aaKnown RBP12.51□□□□□ -0.41
CPSF6-201ENST00000266679 FBXL8Q96CD0 374 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 CXorf21Q9HAI6 301 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 TIMMDC1Q9NPL8 285 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 TDP1Q9NUW8 608 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 TMED5Q9Y3A6 229 aa12.51□□□□□ -0.41
CPSF6-201ENST00000266679 E7EQ34 232 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 WNT9AO14904 365 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 KPNA5O15131 536 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 TSPAN6O43657 245 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 E2F6O75461 281 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 GSTM1P09488 218 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 TIMP2P16035 220 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 XPAP23025 273 aaPredicted RBP12.5□□□□□ -0.41
CPSF6-201ENST00000266679 MAP4P27816 1152 aaKnown RBP12.5□□□□□ -0.41
CPSF6-201ENST00000266679 ERVFC1P60507 584 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 NTHL1P78549 312 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 GSTM4Q03013 218 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 CCSMST1Q4G0I0 132 aa12.5□□□□□ -0.41
CPSF6-201ENST00000266679 XKR6Q5GH73 641 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms