RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 GKP32189 559 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 SLC11A2P49281 568 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 ARF5P84085 180 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 RING1Q06587 406 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 PLEKHG6Q3KR16 790 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 CLLU1OSQ5K130 101 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 PRSS48Q7RTY5 328 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 ZBTB2Q8N680 514 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 TRPV1Q8NER1 839 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 APIPQ96GX9 242 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 PANX1Q96RD7 426 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 REEP1Q9H902 201 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 PCDHB1Q9Y5F3 818 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 PLXNA4Q9HCM2 1894 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 A0A1W2PQ67 120 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 CLDN9O95484 217 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 KRT6AP02538 564 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 KRT6BP04259 564 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 EBLN1P0CF75 366 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 HSMCR30P0CW71 290 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 AKR1A1P14550 325 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 PTPN6P29350 595 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 MAGEA2P43356 314 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 KRT6CP48668 564 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 CLDN8P56748 225 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 RHOAP61586 193 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 NPRL3Q12980 569 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 SF1Q15637 639 aaKnown RBP16.97■□□□□ 0.31
TRAM1-201ENST00000262213 LRIF1Q5T3J3 769 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 RSPO2Q6UXX9 243 aaPredicted RBP16.97■□□□□ 0.31
TRAM1-201ENST00000262213 SPATC1Q76KD6 591 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 CCDC103Q8IW40 242 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 RAVER1Q8IY67 606 aaKnown RBP16.97■□□□□ 0.31
TRAM1-201ENST00000262213 APH1BQ8WW43 257 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 SLC38A4Q969I6 547 aa16.97■□□□□ 0.31
TRAM1-201ENST00000262213 THG1LQ9NWX6 298 aaKnown RBP16.97■□□□□ 0.31
TRAM1-201ENST00000262213 CLIC1O00299 241 aa16.96■□□□□ 0.31
TRAM1-201ENST00000262213 ZNF24P17028 368 aa16.96■□□□□ 0.31
TRAM1-201ENST00000262213 SDC1P18827 310 aa16.96■□□□□ 0.31
TRAM1-201ENST00000262213 DESI1Q6ICB0 168 aa16.96■□□□□ 0.31
TRAM1-201ENST00000262213 ENTHD1Q8IYW4 607 aa16.96■□□□□ 0.31
TRAM1-201ENST00000262213 GPR62Q9BZJ7 368 aa16.96■□□□□ 0.31
TRAM1-201ENST00000262213 RUBCNLQ9H714 662 aa16.96■□□□□ 0.31
TRAM1-201ENST00000262213 CCNB1IP1Q9NPC3 277 aa16.96■□□□□ 0.31
TRAM1-201ENST00000262213 TRMT13Q9NUP7 481 aaKnown RBP16.96■□□□□ 0.31
TRAM1-201ENST00000262213 ARL15Q9NXU5 204 aa16.96■□□□□ 0.31
TRAM1-201ENST00000262213 CRLS1Q9UJA2 301 aa16.96■□□□□ 0.31
TRAM1-201ENST00000262213 RNF6Q9Y252 685 aa16.96■□□□□ 0.31
TRAM1-201ENST00000262213 MTMR11A4FU01 709 aa16.96■□□□□ 0.31
TRAM1-201ENST00000262213 K7ERQ8 282 aa16.96■□□□□ 0.31
TRAM1-201ENST00000262213 FPGTO14772 594 aa16.96■□□□□ 0.31
TRAM1-201ENST00000262213 ASNA1O43681 348 aa16.96■□□□□ 0.31
TRAM1-201ENST00000262213 RFPL2O75678 378 aa16.96■□□□□ 0.31
TRAM1-201ENST00000262213 KLKB1P03952 638 aa16.96■□□□□ 0.31
TRAM1-201ENST00000262213 GRK5P34947 590 aa16.96■□□□□ 0.31
TRAM1-201ENST00000262213 ATP5C1P36542 298 aaKnown RBP16.96■□□□□ 0.31
TRAM1-201ENST00000262213 GJA8P48165 433 aa16.96■□□□□ 0.31
TRAM1-201ENST00000262213 CASP9P55211 416 aa16.96■□□□□ 0.31
TRAM1-201ENST00000262213 CAMK2GQ13555 558 aaPredicted RBP16.96■□□□□ 0.31
TRAM1-201ENST00000262213 TIGD6Q17RP2 521 aa16.96■□□□□ 0.31
TRAM1-201ENST00000262213 TSPYL5Q86VY4 417 aaPredicted RBP16.96■□□□□ 0.31
TRAM1-201ENST00000262213 ROGDIQ9GZN7 287 aa16.96■□□□□ 0.31
TRAM1-201ENST00000262213 RMI1Q9H9A7 625 aa16.96■□□□□ 0.31
TRAM1-201ENST00000262213 HCSTQ9UBK5 93 aa16.96■□□□□ 0.31
TRAM1-201ENST00000262213 TRPS1Q9UHF7 1281 aa16.96■□□□□ 0.31
TRAM1-201ENST00000262213 CHD5Q8TDI0 1954 aa16.95■□□□□ 0.3
TRAM1-201ENST00000262213 NT5C1B-RDH14C9J2C7 533 aa16.95■□□□□ 0.3
TRAM1-201ENST00000262213 M0R129 80 aa16.95■□□□□ 0.3
TRAM1-201ENST00000262213 MZF1P28698 734 aaPredicted RBP16.95■□□□□ 0.3
TRAM1-201ENST00000262213 PPP3CCP48454 512 aa16.95■□□□□ 0.3
TRAM1-201ENST00000262213 TRPC1P48995 793 aa16.95■□□□□ 0.3
TRAM1-201ENST00000262213 CXCR4P61073 352 aa16.95■□□□□ 0.3
TRAM1-201ENST00000262213 TPRG1LQ5T0D9 272 aa16.95■□□□□ 0.3
TRAM1-201ENST00000262213 LINC00299Q6ZSB3 139 aa16.95■□□□□ 0.3
TRAM1-201ENST00000262213 CLECL1Q8IZS7 167 aa16.95■□□□□ 0.3
TRAM1-201ENST00000262213 CARNMT1Q8N4J0 409 aa16.95■□□□□ 0.3
TRAM1-201ENST00000262213 REXO4Q9GZR2 422 aaKnown RBP16.95■□□□□ 0.3
TRAM1-201ENST00000262213 GABARAPL1Q9H0R8 117 aa16.95■□□□□ 0.3
TRAM1-201ENST00000262213 AP3M1Q9Y2T2 418 aa16.95■□□□□ 0.3
TRAM1-201ENST00000262213 MICAL3Q7RTP6 2002 aa16.95■□□□□ 0.3
TRAM1-201ENST00000262213 AGAP5A6NIR3 686 aa16.95■□□□□ 0.3
TRAM1-201ENST00000262213 M0R082 166 aa16.95■□□□□ 0.3
TRAM1-201ENST00000262213 NUDT7P0C024 238 aa16.95■□□□□ 0.3
TRAM1-201ENST00000262213 CORO1AP31146 461 aaKnown RBP16.95■□□□□ 0.3
TRAM1-201ENST00000262213 KDELR2P33947 212 aa16.95■□□□□ 0.3
TRAM1-201ENST00000262213 IDH2P48735 452 aaKnown RBP16.95■□□□□ 0.3
TRAM1-201ENST00000262213 VMACQ2NL98 169 aa16.95■□□□□ 0.3
TRAM1-201ENST00000262213 LRIT3Q3SXY7 679 aa16.95■□□□□ 0.3
TRAM1-201ENST00000262213 NCEH1Q6PIU2 408 aa16.95■□□□□ 0.3
TRAM1-201ENST00000262213 RTN4RL1Q86UN2 441 aaPredicted RBP16.95■□□□□ 0.3
TRAM1-201ENST00000262213 RBFAQ8N0V3 343 aa16.95■□□□□ 0.3
TRAM1-201ENST00000262213 BEND7Q8N7W2 519 aaPredicted RBP16.95■□□□□ 0.3
TRAM1-201ENST00000262213 USP7Q93009 1102 aa16.95■□□□□ 0.3
TRAM1-201ENST00000262213 WBP2Q969T9 261 aa16.95■□□□□ 0.3
TRAM1-201ENST00000262213 CHCHD6Q9BRQ6 235 aa16.95■□□□□ 0.3
TRAM1-201ENST00000262213 OR51E2Q9H255 320 aa16.95■□□□□ 0.3
TRAM1-201ENST00000262213 DNMT3LQ9UJW3 386 aa16.95■□□□□ 0.3
TRAM1-201ENST00000262213 METTL15A6NJ78 407 aa16.94■□□□□ 0.3
TRAM1-201ENST00000262213 H7C0S8 307 aa16.94■□□□□ 0.3
TRAM1-201ENST00000262213 CLDN11O75508 207 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms