RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 OR5K1Q8NHB7 308 aa12.64□□□□□ -0.39
SNX1-201ENST00000261889 HSH2DQ96JZ2 352 aa12.64□□□□□ -0.39
SNX1-201ENST00000261889 ZNF641Q96N77 438 aaPredicted RBP12.64□□□□□ -0.39
SNX1-201ENST00000261889 ASB2Q96Q27 587 aa12.64□□□□□ -0.39
SNX1-201ENST00000261889 PANX1Q96RD7 426 aa12.64□□□□□ -0.39
SNX1-201ENST00000261889 WDR12Q9GZL7 423 aaKnown RBP12.64□□□□□ -0.39
SNX1-201ENST00000261889 DCAF13Q9NV06 445 aaKnown RBP12.64□□□□□ -0.39
SNX1-201ENST00000261889 NLE1Q9NVX2 485 aaPredicted RBP12.64□□□□□ -0.39
SNX1-201ENST00000261889 C1orf109Q9NX04 203 aa12.64□□□□□ -0.39
SNX1-201ENST00000261889 ACSL6Q9UKU0 697 aa12.64□□□□□ -0.39
SNX1-201ENST00000261889 YY2O15391 372 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 CSF2P04141 144 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 PURAQ00577 322 aaKnown RBP12.63□□□□□ -0.39
SNX1-201ENST00000261889 IL10RBQ08334 325 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 DMC1Q14565 340 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 MED22Q15528 200 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 P3H2Q8IVL5 708 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 BEND7Q8N7W2 519 aaPredicted RBP12.63□□□□□ -0.39
SNX1-201ENST00000261889 DTX3Q8N9I9 347 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 PXYLP1Q8TE99 480 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 TRIB2Q92519 343 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 NELL1Q92832 810 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 ZNF382Q96SR6 550 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 COPS4Q9BT78 406 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 GPR62Q9BZJ7 368 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 BTBD3Q9Y2F9 522 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 ARIH1Q9Y4X5 557 aaPredicted RBP12.63□□□□□ -0.39
SNX1-201ENST00000261889 GREB1Q4ZG55 1949 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 CKAP5Q14008 2032 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 TRIM64BA6NI03 449 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 ANKRD66B4E2M5 251 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 WBP4O75554 376 aaKnown RBP12.63□□□□□ -0.39
SNX1-201ENST00000261889 CCNKO75909 580 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 PTHP01270 115 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 CKMT1AP12532 417 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 GNPDA1P46926 289 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 CLCN7P51798 805 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 UBE3AQ05086 875 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 KIAA0040Q15053 153 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 TYSND1Q2T9J0 566 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 ABI3BPQ7Z7G0 1075 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 TMEM173Q86WV6 379 aaPredicted RBP12.63□□□□□ -0.39
SNX1-201ENST00000261889 NKAPQ8N5F7 415 aaKnown RBP12.63□□□□□ -0.39
SNX1-201ENST00000261889 ATP6V0D2Q8N8Y2 350 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 SCAIQ8N9R8 606 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 OR9Q2Q8NGE9 314 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 OR5AK3PQ8NH89 298 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 PYURFQ96I23 114 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 BTN2A3PQ96KV6 586 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 RNF38Q9H0F5 515 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 TRIM39Q9HCM9 518 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 SCN3BQ9NY72 215 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 SRRDQ9UH36 339 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 ADAM12O43184 909 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 IGFBP1P08833 259 aaPredicted RBP12.63□□□□□ -0.39
SNX1-201ENST00000261889 ENGP17813 658 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 ITIH1P19827 911 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 DNAJB1P25685 340 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 EIF2DP41214 584 aaKnown RBP12.63□□□□□ -0.39
SNX1-201ENST00000261889 SUOXP51687 545 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 ILF2Q12905 390 aaKnown RBP12.63□□□□□ -0.39
SNX1-201ENST00000261889 ZXDCQ2QGD7 858 aaPredicted RBP12.63□□□□□ -0.39
SNX1-201ENST00000261889 USP39Q53GS9 565 aaKnown RBP12.63□□□□□ -0.39
SNX1-201ENST00000261889 IER5LQ5T953 404 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 OR5M11Q96RB7 305 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 TRIB3Q96RU7 358 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 TSEN34Q9BSV6 310 aaKnown RBP12.63□□□□□ -0.39
SNX1-201ENST00000261889 CEP44Q9C0F1 390 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 THUMPD1Q9NXG2 353 aaKnown RBP12.63□□□□□ -0.39
SNX1-201ENST00000261889 ARL15Q9NXU5 204 aa12.63□□□□□ -0.39
SNX1-201ENST00000261889 TAF4O00268 1085 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 KPNA5O15131 536 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 VPS4BO75351 444 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 KLKB1P03952 638 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 PTNP21246 168 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 MRPS15P82914 257 aaKnown RBP12.62□□□□□ -0.39
SNX1-201ENST00000261889 PRKCZQ05513 592 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 TIGD6Q17RP2 521 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 TPRG1LQ5T0D9 272 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 TMC5Q6UXY8 1006 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 METTL4Q8N3J2 472 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 ZNF296Q8WUU4 475 aaPredicted RBP12.62□□□□□ -0.39
SNX1-201ENST00000261889 TMEM203Q969S6 136 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 SH3KBP1Q96B97 665 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 IL4I1Q96RQ9 567 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 CLPBQ9H078 707 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 MMP28Q9H239 520 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 AASDHPPTQ9NRN7 309 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 GFRA2O00451 464 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 SMAD6O43541 496 aaKnown RBP12.62□□□□□ -0.39
SNX1-201ENST00000261889 ASNA1O43681 348 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 RRM2P31350 389 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 PRMT2P55345 433 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 TUBA3CQ13748 450 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 IRF3Q14653 427 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 CACHD1Q5VU97 1274 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 OR2T5Q6IEZ7 315 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 GLCCI1Q86VQ1 547 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 COLGALT2Q8IYK4 626 aa12.62□□□□□ -0.39
SNX1-201ENST00000261889 ENTHD1Q8IYW4 607 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms