RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 R3HDM4Q96D70 268 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 FBXO17Q96EF6 278 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 TCEAL4Q96EI5 215 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 NECTIN4Q96NY8 510 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 FAM129BQ96TA1 746 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 SEMA4CQ9C0C4 833 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 C14orf105Q9NVL8 296 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 NUDT5Q9UKK9 219 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 PXDNLA1KZ92 1463 aa7.56□□□□□ -1.2
GPNMB-201ENST00000258733 A0A1W2PQC6 194 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 A0A1W2PRB8 838 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 hCG_1807616A0A1W2PRN6 198 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 KCNK3O14649 394 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 OR10H2O60403 315 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 PRAMEF2O60811 474 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 TMEM63AO94886 807 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 LYPLA2O95372 231 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 SEC24AO95486 1093 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 CPNE6O95741 557 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 ZNF26P17031 533 aaPredicted RBP7.55□□□□□ -1.2
GPNMB-201ENST00000258733 JUNBP17275 347 aaPredicted RBP7.55□□□□□ -1.2
GPNMB-201ENST00000258733 CPOXP36551 454 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 CAPGP40121 348 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 MAGEA1P43355 309 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 CDKN1BP46527 198 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 PSMD8P48556 350 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 MRPS11P82912 194 aaKnown RBP7.55□□□□□ -1.2
GPNMB-201ENST00000258733 POU4F1Q01851 419 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 PTH1RQ03431 593 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 DGUOKQ16854 277 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 C1orf141Q5JVX7 400 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 CATSPEREQ5SY80 951 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 FAM182AQ5T1J6 154 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 TIGD3Q6B0B8 471 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 KIAA1161Q6NSJ0 714 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 ZNF813Q6ZN06 617 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 GK5Q6ZS86 529 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 FAM92BQ6ZTR7 304 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 CENPUQ71F23 418 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 SLC46A3Q7Z3Q1 461 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 ZNF467Q7Z7K2 595 aaPredicted RBP7.55□□□□□ -1.2
GPNMB-201ENST00000258733 RASAL3Q86YV0 1011 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 CCDC71Q8IV32 467 aaPredicted RBP7.55□□□□□ -1.2
GPNMB-201ENST00000258733 ZNF557Q8N988 423 aaPredicted RBP7.55□□□□□ -1.2
GPNMB-201ENST00000258733 PIGKQ92643 395 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 NXNL1Q96CM4 212 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 MRGPRX4Q96LA9 322 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 SFXN2Q96NB2 322 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 CMSS1Q9BQ75 279 aaKnown RBP7.55□□□□□ -1.2
GPNMB-201ENST00000258733 APOL6Q9BWW8 343 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 BEX2Q9BXY8 128 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 MED17Q9NVC6 651 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 ARMCX3Q9UH62 379 aaPredicted RBP7.55□□□□□ -1.2
GPNMB-201ENST00000258733 CLEC2DQ9UHP7 191 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 KDM4EB2RXH2 506 aaPredicted RBP7.55□□□□□ -1.2
GPNMB-201ENST00000258733 ADAMDEC1O15204 470 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 STX7O15400 261 aaKnown RBP7.55□□□□□ -1.2
GPNMB-201ENST00000258733 KCNAB3O43448 404 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 MRPS14O60783 128 aaKnown RBP7.55□□□□□ -1.2
GPNMB-201ENST00000258733 ABCB7O75027 752 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 GADD45GO95257 159 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 ZSCAN5DPP0CG00 497 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 FOSL2P15408 326 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 PPP2R1BP30154 601 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 BDKRB2P30411 391 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 RFC3P40938 356 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 MCAMP43121 646 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 AFF3P51826 1226 aaKnown RBP7.55□□□□□ -1.2
GPNMB-201ENST00000258733 SEMG2Q02383 582 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 NHLH2Q02577 135 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 TROAPQ12815 778 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 OVGP1Q12889 678 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 SLAMF1Q13291 335 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 SQSTM1Q13501 440 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 HKDC1Q2TB90 917 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 PAN2Q504Q3 1202 aaKnown RBP7.55□□□□□ -1.2
GPNMB-201ENST00000258733 ACTBL2Q562R1 376 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 SEL1L2Q5TEA6 688 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 SPNS3Q6ZMD2 512 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 MBOAT1Q6ZNC8 495 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 FBXW8Q8N3Y1 598 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 C19orf18Q8NEA5 215 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 ZBED3Q96IU2 234 aaPredicted RBP7.55□□□□□ -1.2
GPNMB-201ENST00000258733 TEPSINQ96N21 525 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 COL21A1Q96P44 957 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 YIPF4Q9BSR8 244 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 ELP3Q9H9T3 547 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 PARD6AQ9NPB6 346 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 SLC35D1Q9NTN3 355 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 NLGN3Q9NZ94 848 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 NUFIP1Q9UHK0 495 aaKnown RBP7.55□□□□□ -1.2
GPNMB-201ENST00000258733 ZNF225Q9UK10 706 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 MICAL3Q7RTP6 2002 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 CDK5RAP2Q96SN8 1893 aa7.55□□□□□ -1.2
GPNMB-201ENST00000258733 A0A1W2PPQ1 181 aa7.54□□□□□ -1.2
GPNMB-201ENST00000258733 DCAF8L1A6NGE4 600 aa7.54□□□□□ -1.2
GPNMB-201ENST00000258733 E9PI62 339 aa7.54□□□□□ -1.2
GPNMB-201ENST00000258733 PMPCBO75439 489 aa7.54□□□□□ -1.2
GPNMB-201ENST00000258733 CTAG2O75638 210 aa7.54□□□□□ -1.2
GPNMB-201ENST00000258733 UGT2B17O75795 530 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms