RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 A0A1W2PPV9 198 aa18.52■□□□□ 0.56
SBDS-201ENST00000246868 PIPSLA2A3N6 862 aa18.52■□□□□ 0.56
SBDS-201ENST00000246868 OR6C74A6NCV1 312 aa18.52■□□□□ 0.56
SBDS-201ENST00000246868 TRPC5OSA6NMA1 111 aa18.52■□□□□ 0.56
SBDS-201ENST00000246868 ISM1B1AKI9 464 aa18.52■□□□□ 0.56
SBDS-201ENST00000246868 TMEM233B4DJY2 109 aa18.52■□□□□ 0.56
SBDS-201ENST00000246868 SNX3O60493 162 aa18.52■□□□□ 0.56
SBDS-201ENST00000246868 AQP5P55064 265 aa18.52■□□□□ 0.56
SBDS-201ENST00000246868 PCDH1Q08174 1060 aa18.52■□□□□ 0.56
SBDS-201ENST00000246868 TCF15Q12870 199 aa18.52■□□□□ 0.56
SBDS-201ENST00000246868 SF3A3Q12874 501 aaKnown RBP eCLIP18.52■□□□□ 0.56
SBDS-201ENST00000246868 KIR2DS3Q14952 304 aa18.52■□□□□ 0.56
SBDS-201ENST00000246868 TBCCQ15814 346 aa18.52■□□□□ 0.56
SBDS-201ENST00000246868 GGTA1PQ4G0N0 100 aa18.52■□□□□ 0.56
SBDS-201ENST00000246868 KANK2Q63ZY3 851 aa18.52■□□□□ 0.56
SBDS-201ENST00000246868 ARMC6Q6NXE6 501 aa18.52■□□□□ 0.56
SBDS-201ENST00000246868 TMPRSS11BQ86T26 416 aa18.52■□□□□ 0.56
SBDS-201ENST00000246868 L3MBTL4Q8NA19 623 aa18.52■□□□□ 0.56
SBDS-201ENST00000246868 PRSS33Q8NF86 280 aa18.52■□□□□ 0.56
SBDS-201ENST00000246868 OR4C6Q8NH72 309 aa18.52■□□□□ 0.56
SBDS-201ENST00000246868 OR10G6Q8NH81 332 aa18.52■□□□□ 0.56
SBDS-201ENST00000246868 SLC29A3Q9BZD2 475 aa18.52■□□□□ 0.56
SBDS-201ENST00000246868 EHD1Q9H4M9 534 aa18.52■□□□□ 0.56
SBDS-201ENST00000246868 TNFRSF12AQ9NP84 129 aa18.52■□□□□ 0.56
SBDS-201ENST00000246868 RNF11Q9Y3C5 154 aa18.52■□□□□ 0.56
SBDS-201ENST00000246868 ENTPD2Q9Y5L3 495 aa18.52■□□□□ 0.56
SBDS-201ENST00000246868 LILRA5A6NI73 299 aa18.52■□□□□ 0.55
SBDS-201ENST00000246868 PPM1DO15297 605 aa18.52■□□□□ 0.55
SBDS-201ENST00000246868 PCDHGA12O60330 932 aa18.52■□□□□ 0.55
SBDS-201ENST00000246868 CAPN1P07384 714 aa18.52■□□□□ 0.55
SBDS-201ENST00000246868 HNF4AP41235 474 aa18.52■□□□□ 0.55
SBDS-201ENST00000246868 ABATP80404 500 aa18.52■□□□□ 0.55
SBDS-201ENST00000246868 SF1Q15637 639 aaKnown RBP18.52■□□□□ 0.55
SBDS-201ENST00000246868 PAGE2BQ5JRK9 111 aa18.52■□□□□ 0.55
SBDS-201ENST00000246868 ICE2Q659A1 982 aa18.52■□□□□ 0.55
SBDS-201ENST00000246868 ATG9BQ674R7 924 aa18.52■□□□□ 0.55
SBDS-201ENST00000246868 SLCO4C1Q6ZQN7 724 aa18.52■□□□□ 0.55
SBDS-201ENST00000246868 PIGWQ7Z7B1 504 aa18.52■□□□□ 0.55
SBDS-201ENST00000246868 OOSP2Q86WS3 158 aa18.52■□□□□ 0.55
SBDS-201ENST00000246868 ZNF761Q86XN6 746 aaPredicted RBP18.52■□□□□ 0.55
SBDS-201ENST00000246868 SLC35F3Q8IY50 421 aa18.52■□□□□ 0.55
SBDS-201ENST00000246868 ADGRF3Q8IZF5 1079 aa18.52■□□□□ 0.55
SBDS-201ENST00000246868 MINDY1Q8N5J2 469 aa18.52■□□□□ 0.55
SBDS-201ENST00000246868 OR2I1PQ8NGU4 316 aa18.52■□□□□ 0.55
SBDS-201ENST00000246868 CCT6BQ92526 530 aa18.52■□□□□ 0.55
SBDS-201ENST00000246868 PTCD3Q96EY7 689 aaKnown RBP18.52■□□□□ 0.55
SBDS-201ENST00000246868 KCNA7Q96RP8 456 aa18.52■□□□□ 0.55
SBDS-201ENST00000246868 EFCAB11Q9BUY7 163 aa18.52■□□□□ 0.55
SBDS-201ENST00000246868 KCNK4Q9NYG8 393 aa18.52■□□□□ 0.55
SBDS-201ENST00000246868 ARID1BQ8NFD5 2236 aaPredicted RBP18.52■□□□□ 0.55
SBDS-201ENST00000246868 GSAPA4D1B5 854 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 BTN3A3O00478 584 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 NUDT21O43809 227 aaKnown RBP18.51■□□□□ 0.55
SBDS-201ENST00000246868 WFS1O76024 890 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 KRT6AP02538 564 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 KRT6BP04259 564 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 GIMD1P0DJR0 217 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 C1GALT1C1LP0DN25 315 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 PSMB5P28074 263 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 CMPK1P30085 196 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 CASP2P42575 452 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 KRT6CP48668 564 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 PPM1FP49593 454 aaPredicted RBP18.51■□□□□ 0.55
SBDS-201ENST00000246868 ARFIP2P53365 341 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 FOXA1P55317 472 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 PRDX1Q06830 199 aaKnown RBP18.51■□□□□ 0.55
SBDS-201ENST00000246868 DOC2AQ14183 400 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 SUZ12Q15022 739 aaKnown RBP18.51■□□□□ 0.55
SBDS-201ENST00000246868 TERF2Q15554 542 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 PDCD2Q16342 344 aaPredicted RBP18.51■□□□□ 0.55
SBDS-201ENST00000246868 CPSF6Q16630 551 aaKnown RBP eCLIP18.51■□□□□ 0.55
SBDS-201ENST00000246868 TCEAL6Q6IPX3 200 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 NXPE4Q6UWF7 544 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 SUMF1Q8NBK3 374 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 OR2A1Q8NGT9 310 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 RFWD2Q8NHY2 731 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 ATOH1Q92858 354 aaPredicted RBP18.51■□□□□ 0.55
SBDS-201ENST00000246868 TCEAL3Q969E4 200 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 PELI2Q9HAT8 420 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 MRPS30Q9NP92 439 aaKnown RBP18.51■□□□□ 0.55
SBDS-201ENST00000246868 HRASLS2Q9NWW9 162 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 SPHK1Q9NYA1 384 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 LRIT1Q9P2V4 623 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 SNX6Q9UNH7 406 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 TIMM22Q9Y584 194 aa18.51■□□□□ 0.55
SBDS-201ENST00000246868 DMDP11532 3685 aa18.5■□□□□ 0.55
SBDS-201ENST00000246868 C2orf74A8MZ97 194 aa18.5■□□□□ 0.55
SBDS-201ENST00000246868 PRICKLE3O43900 615 aaPredicted RBP18.5■□□□□ 0.55
SBDS-201ENST00000246868 SKAP2O75563 359 aaPredicted RBP18.5■□□□□ 0.55
SBDS-201ENST00000246868 UBXN7O94888 489 aa18.5■□□□□ 0.55
SBDS-201ENST00000246868 ZNF883P0CG24 379 aa18.5■□□□□ 0.55
SBDS-201ENST00000246868 CDH1P12830 882 aa18.5■□□□□ 0.55
SBDS-201ENST00000246868 JUPP14923 745 aa18.5■□□□□ 0.55
SBDS-201ENST00000246868 ALOX15P16050 662 aaPredicted RBP18.5■□□□□ 0.55
SBDS-201ENST00000246868 GLB1P16278 677 aa18.5■□□□□ 0.55
SBDS-201ENST00000246868 AMD1P17707 334 aa18.5■□□□□ 0.55
SBDS-201ENST00000246868 POLR2CP19387 275 aaPredicted RBP18.5■□□□□ 0.55
SBDS-201ENST00000246868 SERPINB3P29508 390 aa18.5■□□□□ 0.55
SBDS-201ENST00000246868 LAPTM5Q13571 262 aa18.5■□□□□ 0.55
SBDS-201ENST00000246868 HIST2H2ACQ16777 129 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms