RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 HDAC2Q92769 488 aaKnown RBP21.28■■□□□ 1
RNF39-201ENST00000244360 LRIG1Q96JA1 1093 aa21.28■■□□□ 1
RNF39-201ENST00000244360 VPS35Q96QK1 796 aa21.28■■□□□ 1
RNF39-201ENST00000244360 SLC6A13Q9NSD5 602 aa21.28■■□□□ 1
RNF39-201ENST00000244360 IL36AQ9UHA7 158 aa21.28■■□□□ 1
RNF39-201ENST00000244360 A0A1W2PPW3 197 aa21.28■■□□□ 1
RNF39-201ENST00000244360 FAM220BPB1ANY3 271 aa21.28■■□□□ 1
RNF39-201ENST00000244360 PSIP1O75475 530 aaKnown RBP21.28■■□□□ 1
RNF39-201ENST00000244360 SEC14L2O76054 403 aa21.28■■□□□ 1
RNF39-201ENST00000244360 EEF1B2P24534 225 aaKnown RBP21.28■■□□□ 1
RNF39-201ENST00000244360 S100A3P33764 101 aa21.28■■□□□ 1
RNF39-201ENST00000244360 GZMMP51124 257 aa21.28■■□□□ 1
RNF39-201ENST00000244360 GTDC1Q4AE62 458 aa21.28■■□□□ 1
RNF39-201ENST00000244360 ZNF805Q5CZA5 627 aa21.28■■□□□ 1
RNF39-201ENST00000244360 DNAJC14Q6Y2X3 702 aaPredicted RBP21.28■■□□□ 1
RNF39-201ENST00000244360 ZNF554Q86TJ5 538 aa21.28■■□□□ 1
RNF39-201ENST00000244360 STK32CQ86UX6 486 aa21.28■■□□□ 1
RNF39-201ENST00000244360 KLHDC8AQ8IYD2 350 aa21.28■■□□□ 1
RNF39-201ENST00000244360 MICU2Q8IYU8 434 aa21.28■■□□□ 1
RNF39-201ENST00000244360 TBC1D15Q8TC07 691 aa21.28■■□□□ 1
RNF39-201ENST00000244360 FIG4Q92562 907 aa21.28■■□□□ 1
RNF39-201ENST00000244360 ZSWIM3Q96MP5 696 aa21.28■■□□□ 1
RNF39-201ENST00000244360 USE1Q9NZ43 259 aa21.28■■□□□ 1
RNF39-201ENST00000244360 PPT2Q9UMR5 302 aa21.28■■□□□ 1
RNF39-201ENST00000244360 PCDHB14Q9Y5E9 798 aa21.28■■□□□ 1
RNF39-201ENST00000244360 HCFC2Q9Y5Z7 792 aa21.28■■□□□ 1
RNF39-201ENST00000244360 G3V2T6 193 aa21.27■■□□□ 1
RNF39-201ENST00000244360 SYN1P17600 705 aa21.27■■□□□ 1
RNF39-201ENST00000244360 AMD1P17707 334 aa21.27■■□□□ 1
RNF39-201ENST00000244360 CCNA2P20248 432 aa21.27■■□□□ 1
RNF39-201ENST00000244360 ITPKAP23677 461 aa21.27■■□□□ 1
RNF39-201ENST00000244360 TACR1P25103 407 aa21.27■■□□□ 1
RNF39-201ENST00000244360 BMPR1AP36894 532 aa21.27■■□□□ 1
RNF39-201ENST00000244360 NNMTP40261 264 aa21.27■■□□□ 1
RNF39-201ENST00000244360 GABARAPL2P60520 117 aa21.27■■□□□ 1
RNF39-201ENST00000244360 NECAB2Q7Z6G3 386 aa21.27■■□□□ 1
RNF39-201ENST00000244360 FAM86B1Q8N7N1 296 aa21.27■■□□□ 1
RNF39-201ENST00000244360 NAT16Q8N8M0 369 aa21.27■■□□□ 1
RNF39-201ENST00000244360 ZNF555Q8NEP9 628 aa21.27■■□□□ 1
RNF39-201ENST00000244360 RAB2BQ8WUD1 216 aa21.27■■□□□ 1
RNF39-201ENST00000244360 BTN2A2Q8WVV5 523 aa21.27■■□□□ 1
RNF39-201ENST00000244360 APIPQ96GX9 242 aa21.27■■□□□ 1
RNF39-201ENST00000244360 ITCHQ96J02 903 aa21.27■■□□□ 1
RNF39-201ENST00000244360 RMND5AQ9H871 391 aa21.27■■□□□ 1
RNF39-201ENST00000244360 PALMDQ9NP74 551 aa21.27■■□□□ 1
RNF39-201ENST00000244360 BLOC1S6Q9UL45 172 aa21.27■■□□□ 1
RNF39-201ENST00000244360 INVSQ9Y283 1065 aa21.27■■□□□ 1
RNF39-201ENST00000244360 KRT87PA6NCN2 255 aa21.27■□□□□ 0.99
RNF39-201ENST00000244360 RETP07949 1114 aa21.27■□□□□ 0.99
RNF39-201ENST00000244360 MMP12P39900 470 aa21.27■□□□□ 0.99
RNF39-201ENST00000244360 NTHL1P78549 312 aa21.27■□□□□ 0.99
RNF39-201ENST00000244360 SKIV2LQ15477 1246 aaKnown RBP21.27■□□□□ 0.99
RNF39-201ENST00000244360 NKG7Q16617 165 aa21.27■□□□□ 0.99
RNF39-201ENST00000244360 MOGQ16653 247 aa21.27■□□□□ 0.99
RNF39-201ENST00000244360 LDLRAP1Q5SW96 308 aa21.27■□□□□ 0.99
RNF39-201ENST00000244360 LIPJQ5W064 366 aa21.27■□□□□ 0.99
RNF39-201ENST00000244360 CYP2U1Q7Z449 544 aa21.27■□□□□ 0.99
RNF39-201ENST00000244360 GPR149Q86SP6 731 aa21.27■□□□□ 0.99
RNF39-201ENST00000244360 GLMNQ92990 594 aa21.27■□□□□ 0.99
RNF39-201ENST00000244360 FAM210AQ96ND0 272 aa21.27■□□□□ 0.99
RNF39-201ENST00000244360 ADGRE2Q9UHX3 823 aa21.27■□□□□ 0.99
RNF39-201ENST00000244360 ARHGEF33A8MVX0 844 aa21.26■□□□□ 0.99
RNF39-201ENST00000244360 CXCR6O00574 342 aa21.26■□□□□ 0.99
RNF39-201ENST00000244360 HNRNPA1P09651 372 aaKnown RBP eCLIP21.26■□□□□ 0.99
RNF39-201ENST00000244360 MAP4P27816 1152 aaKnown RBP21.26■□□□□ 0.99
RNF39-201ENST00000244360 ELK4P28324 431 aa21.26■□□□□ 0.99
RNF39-201ENST00000244360 SHMT2P34897 504 aa21.26■□□□□ 0.99
RNF39-201ENST00000244360 CTNNB1P35222 781 aa21.26■□□□□ 0.99
RNF39-201ENST00000244360 YAP1P46937 504 aaKnown RBP21.26■□□□□ 0.99
RNF39-201ENST00000244360 CHIT1Q13231 466 aa21.26■□□□□ 0.99
RNF39-201ENST00000244360 TOP3AQ13472 1001 aaPredicted RBP21.26■□□□□ 0.99
RNF39-201ENST00000244360 ZNF284Q2VY69 593 aa21.26■□□□□ 0.99
RNF39-201ENST00000244360 ZIK1Q3SY52 487 aaPredicted RBP21.26■□□□□ 0.99
RNF39-201ENST00000244360 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.26■□□□□ 0.99
RNF39-201ENST00000244360 FGD3Q5JSP0 725 aa21.26■□□□□ 0.99
RNF39-201ENST00000244360 ENPP6Q6UWR7 440 aa21.26■□□□□ 0.99
RNF39-201ENST00000244360 PJA1Q8NG27 643 aa21.26■□□□□ 0.99
RNF39-201ENST00000244360 SPPL3Q8TCT6 385 aa21.26■□□□□ 0.99
RNF39-201ENST00000244360 POF1BQ8WVV4 589 aa21.26■□□□□ 0.99
RNF39-201ENST00000244360 TSSK3Q96PN8 268 aa21.26■□□□□ 0.99
RNF39-201ENST00000244360 ATG10Q9H0Y0 220 aa21.26■□□□□ 0.99
RNF39-201ENST00000244360 FANCEQ9HB96 536 aa21.26■□□□□ 0.99
RNF39-201ENST00000244360 TMEM202A6NGA9 273 aa21.25■□□□□ 0.99
RNF39-201ENST00000244360 CBFA2T3O75081 653 aa21.25■□□□□ 0.99
RNF39-201ENST00000244360 FGBP02675 491 aa21.25■□□□□ 0.99
RNF39-201ENST00000244360 SRPRAP08240 638 aaKnown RBP21.25■□□□□ 0.99
RNF39-201ENST00000244360 GSTM2P28161 218 aa21.25■□□□□ 0.99
RNF39-201ENST00000244360 PCDH1Q08174 1060 aa21.25■□□□□ 0.99
RNF39-201ENST00000244360 NFATC3Q12968 1075 aa21.25■□□□□ 0.99
RNF39-201ENST00000244360 CSTF3Q12996 717 aaKnown RBP21.25■□□□□ 0.99
RNF39-201ENST00000244360 CSGALNACT1Q8TDX6 532 aa21.25■□□□□ 0.99
RNF39-201ENST00000244360 RBM4BQ9BQ04 359 aaKnown RBP21.25■□□□□ 0.99
RNF39-201ENST00000244360 RBM4Q9BWF3 364 aaKnown RBP21.25■□□□□ 0.99
RNF39-201ENST00000244360 MTG2Q9H4K7 406 aa21.25■□□□□ 0.99
RNF39-201ENST00000244360 LMCD1Q9NZU5 365 aa21.25■□□□□ 0.99
RNF39-201ENST00000244360 CXXC1Q9P0U4 656 aaPredicted RBP21.25■□□□□ 0.99
RNF39-201ENST00000244360 OR2AG2A6NM03 316 aa21.25■□□□□ 0.99
RNF39-201ENST00000244360 SLC9A3R1O14745 358 aaPredicted RBP21.25■□□□□ 0.99
RNF39-201ENST00000244360 XYLBO75191 536 aa21.25■□□□□ 0.99
RNF39-201ENST00000244360 CISD3P0C7P0 127 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms