RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 MARCH9Q86YJ5 346 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 ELMOD3Q96FG2 381 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 QRFPRQ96P65 431 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 UHRF1Q96T88 793 aaPredicted RBP12.57□□□□□ -0.4
VAMP4-201ENST00000236192 MAPKAP1Q9BPZ7 522 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 GSX2Q9BZM3 304 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 SETD1AO15047 1707 aaKnown RBP12.57□□□□□ -0.4
VAMP4-201ENST00000236192 GNG14A0A1W2PPG7 69 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 G3V2L1 256 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 GPR25O00155 361 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 C4BPAP04003 597 aaKnown RBP12.57□□□□□ -0.4
VAMP4-201ENST00000236192 THEGLP0DJG4 465 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 ZBTB48P10074 688 aaPredicted RBP12.57□□□□□ -0.4
VAMP4-201ENST00000236192 CDH8P55286 799 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 BLOC1S1P78537 153 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 DOK7Q18PE1 504 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 METTL3Q86U44 580 aaKnown RBP12.57□□□□□ -0.4
VAMP4-201ENST00000236192 OR8J3Q8NGG0 315 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 PCDH19Q8TAB3 1148 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 FRS2Q8WU20 508 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 NR4A3Q92570 626 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 SGK3Q96BR1 496 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 DUS3LQ96G46 650 aaKnown RBP12.57□□□□□ -0.4
VAMP4-201ENST00000236192 MGAT4CQ9UBM8 478 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 ST3GAL5Q9UNP4 418 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 FAM50BQ9Y247 325 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 SLC28A2O43868 658 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 LALBAP00709 142 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 SOX10P56693 466 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 SREBF2Q12772 1141 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 TUBB3Q13509 450 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 AQP6Q13520 282 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 OR10Z1Q8NGY1 313 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 C12orf66Q96MD2 445 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 PPP4R1LQ9P1A2 415 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 UPB1Q9UBR1 384 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 NUBP2Q9Y5Y2 271 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 MEIS2O14770 477 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 SLC43A1O75387 559 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 SNAPINO95295 136 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 AFF1P51825 1210 aaKnown RBP12.57□□□□□ -0.4
VAMP4-201ENST00000236192 MPZL3Q6UWV2 235 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 MAVSQ7Z434 540 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 ZNF567Q8N184 647 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 FBXL6Q8N531 539 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 ZNF557Q8N988 423 aaPredicted RBP12.57□□□□□ -0.4
VAMP4-201ENST00000236192 INO80EQ8NBZ0 244 aaPredicted RBP12.57□□□□□ -0.4
VAMP4-201ENST00000236192 EMCNQ9ULC0 261 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 ERVW-1Q9UQF0 538 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 MYH4Q9Y623 1939 aa12.57□□□□□ -0.4
VAMP4-201ENST00000236192 LEUTXA8MZ59 168 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 SMLR1H3BR10 107 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 ZP3P21754 424 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 CCNJQ5T5M9 372 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 LINGO2Q7L985 606 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 MTFMTQ96DP5 389 aaKnown RBP12.56□□□□□ -0.4
VAMP4-201ENST00000236192 HDHD5Q9BXW7 423 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 ADGRE3Q9BY15 652 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 EMC7Q9NPA0 242 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 NUDT15Q9NV35 164 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 HLA-DPB1P04440 258 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 OR4D2P58180 307 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 IFITM2Q01629 132 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 BIKQ13323 160 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 SLC35F1Q5T1Q4 408 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 C3orf33Q6P1S2 294 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 KRT77Q7Z794 578 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 ST6GALNAC4Q9H4F1 302 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 SCP2D1Q9UJQ7 156 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 POU2F1P14859 743 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 RBM34P42696 430 aaKnown RBP12.56□□□□□ -0.4
VAMP4-201ENST00000236192 MAGEA12P43365 314 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 ANXA11P50995 505 aaKnown RBP12.56□□□□□ -0.4
VAMP4-201ENST00000236192 KCNQ1P51787 676 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 EIF5AP63241 154 aaKnown RBP12.56□□□□□ -0.4
VAMP4-201ENST00000236192 NPRL3Q12980 569 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 GRIN2CQ14957 1233 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 EXOC3L2Q2M3D2 409 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 HAVCR1Q96D42 359 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 SECISBP2Q96T21 854 aaKnown RBP12.56□□□□□ -0.4
VAMP4-201ENST00000236192 CRB3Q9BUF7 120 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 DUSP16Q9BY84 665 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 ZNF350Q9GZX5 532 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 BEX1Q9HBH7 125 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 TLR4O00206 839 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 KPNA6O60684 536 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 PAK4O96013 591 aaPredicted RBP12.56□□□□□ -0.4
VAMP4-201ENST00000236192 GGT1P19440 569 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 LAPTM4AQ15012 233 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 RHEBQ15382 184 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 FAM174BQ3ZCQ3 159 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 STEAP4Q687X5 459 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 BLOC1S3Q6QNY0 202 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 DEFB106AQ8N104 65 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 PRDM5Q9NQX1 630 aaPredicted RBP12.56□□□□□ -0.4
VAMP4-201ENST00000236192 OSGIN1Q9UJX0 560 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 FKBP7Q9Y680 259 aa12.56□□□□□ -0.4
VAMP4-201ENST00000236192 FFAR3O14843 346 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 GPR42O15529 346 aa12.55□□□□□ -0.4
VAMP4-201ENST00000236192 RAF1P04049 648 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms