RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 SP140Q13342 867 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 RUNX3Q13761 415 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 PDGFRLQ15198 375 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 UGT3A2Q3SY77 523 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 REP15Q6BDI9 236 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 LETMD1Q6P1Q0 360 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 TMEM220Q6QAJ8 160 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 LIPIQ6XZB0 460 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 TERB1Q8NA31 727 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 KCT2Q8NC54 265 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 VN1R2Q8NFZ6 395 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 ASZ1Q8WWH4 475 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 MED8Q96G25 268 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 RMND5BQ96G75 393 aaPredicted RBP8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 PDLIM5Q96HC4 596 aaKnown RBP8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 LRIG1Q96JA1 1093 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 PNPLA3Q9NST1 481 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 PPIL1Q9Y3C6 166 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 SPEF1Q9Y4P9 236 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 AP4S1Q9Y587 144 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 CDH23Q9H251 3354 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 KRT87PA6NCN2 255 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 LRRC72A6NJI9 287 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 KRT6AP02538 564 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 KRT6BP04259 564 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 ALDOCP09972 364 aaKnown RBP8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 ZNF26P17031 533 aaPredicted RBP8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 ITPKAP23677 461 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 CEACAM7Q14002 265 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 C16orf72Q14CZ0 275 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 HERC3Q15034 1050 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 NRF1Q16656 503 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 DHRS4L2Q6PKH6 230 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 DOK6Q6PKX4 331 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 DSG4Q86SJ6 1040 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 IFNEQ86WN2 208 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 PELI3Q8N2H9 469 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 TMEM102Q8N9M5 508 aaPredicted RBP8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 HM13Q8TCT9 377 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 CXorf40AQ8TE69 158 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 FOPNLQ96NB1 174 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 TMEM79Q9BSE2 394 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 EFHD1Q9BUP0 239 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 RAD18Q9NS91 495 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 TBC1D23Q9NUY8 699 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 DZANK1Q9NVP4 752 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 GDE1Q9NZC3 331 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 MBD1Q9UIS9 605 aaPredicted RBP8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 ANTXRLA6NF34 631 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 CENPBD1B2RD01 187 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 C1QTNF3-AMACRE9PGA6 284 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 H3BNH8 94 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 K7EPI3 171 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 KPNA5O15131 536 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 ULK1O75385 1050 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 OCM2P0CE71 109 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 OCMP0CE72 109 aaPredicted RBP8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 PREPP48147 710 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 HTR6P50406 440 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 ELP6Q0PNE2 266 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 TMEM115Q12893 351 aaPredicted RBP8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 GTF2H3Q13889 308 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 C21orf62-AS1Q17RA5 79 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 HNRNPA1L2Q32P51 320 aaKnown RBP8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 TMEM95Q3KNT9 176 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 USP43Q70EL4 1123 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 GPR141Q7Z602 305 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 CHERPQ8IWX8 916 aaKnown RBP8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 TRAM1L1Q8N609 369 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 GLYATL1Q969I3 302 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 ZNF597Q96LX8 424 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 ZNF382Q96SR6 550 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 NUSAP1Q9BXS6 441 aaKnown RBP8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 CD244Q9BZW8 370 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 COQ10BQ9H8M1 238 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 ARMC1Q9NVT9 282 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 CDH7Q9ULB5 785 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 NDUFAF1Q9Y375 327 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 PCDHGA3Q9Y5H0 932 aa8.67□□□□□ -1.02
MTHFD1-201ENST00000216605 CXorf51AA0A1B0GTR3 108 aa8.66□□□□□ -1.02
MTHFD1-201ENST00000216605 EPOPA6NHQ4 379 aa8.66□□□□□ -1.02
MTHFD1-201ENST00000216605 ATG13O75143 517 aa8.66□□□□□ -1.02
MTHFD1-201ENST00000216605 RECQL5O94762 991 aaPredicted RBP8.66□□□□□ -1.02
MTHFD1-201ENST00000216605 KAT7O95251 611 aa8.66□□□□□ -1.02
MTHFD1-201ENST00000216605 VAMP1P23763 118 aa8.66□□□□□ -1.02
MTHFD1-201ENST00000216605 DDX39BQ13838 428 aaKnown RBP8.66□□□□□ -1.02
MTHFD1-201ENST00000216605 ELAVL3Q14576 367 aaKnown RBP8.66□□□□□ -1.02
MTHFD1-201ENST00000216605 RAB30Q15771 203 aa8.66□□□□□ -1.02
MTHFD1-201ENST00000216605 MOGQ16653 247 aa8.66□□□□□ -1.02
MTHFD1-201ENST00000216605 AP5B1Q2VPB7 878 aa8.66□□□□□ -1.02
MTHFD1-201ENST00000216605 PLA2G4EQ3MJ16 856 aa8.66□□□□□ -1.02
MTHFD1-201ENST00000216605 CFAP161Q6P656 301 aa8.66□□□□□ -1.02
MTHFD1-201ENST00000216605 CRTC3Q6UUV7 619 aa8.66□□□□□ -1.02
MTHFD1-201ENST00000216605 TRMT11Q7Z4G4 463 aaKnown RBP8.66□□□□□ -1.02
MTHFD1-201ENST00000216605 GPR149Q86SP6 731 aa8.66□□□□□ -1.02
MTHFD1-201ENST00000216605 PHYKPLQ8IUZ5 450 aa8.66□□□□□ -1.02
MTHFD1-201ENST00000216605 VRK3Q8IV63 474 aa8.66□□□□□ -1.02
MTHFD1-201ENST00000216605 BTN2A2Q8WVV5 523 aa8.66□□□□□ -1.02
MTHFD1-201ENST00000216605 TMIGD2Q96BF3 282 aa8.66□□□□□ -1.02
MTHFD1-201ENST00000216605 RHBDF1Q96CC6 855 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms