RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 ADAMTS18Q8TE60 1221 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 EXOSC8Q96B26 276 aaKnown RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 CPXM1Q96SM3 734 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 POMKQ9H5K3 350 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 AASSQ9UDR5 926 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 CA14Q9ULX7 337 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 PCDHGA5Q9Y5G8 931 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 PCDHGA2Q9Y5H1 932 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 SLC19A2O60779 497 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 FOXN2P32314 431 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 GABRA2P47869 451 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 CDK9P50750 372 aaKnown RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 KCTD21Q4G0X4 260 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 ATPAF1Q5TC12 328 aaPredicted RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 RNF175Q8N4F7 328 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 ZNF283Q8N7M2 679 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 OR4L1Q8NH43 312 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 SLC2A14Q8TDB8 520 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 UPRTQ96BW1 309 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 SEMA3CQ99985 751 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 GPATCH2LQ9NWQ4 482 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 PTCH2Q9Y6C5 1203 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 EDDM13A0A1B0GTR0 161 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 EIF1AYO14602 144 aaKnown RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 MRASO14807 208 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 PI15O43692 258 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 ERBB2P04626 1255 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 SYN1P17600 705 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 CD52P31358 61 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 SAPCD2Q86UD0 394 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 STEAP2Q8NFT2 490 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 OR2T12Q8NG77 320 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 PDLIM2Q96JY6 352 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 SNX27Q96L92 541 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 EHD4Q9H223 541 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 CDHR5Q9HBB8 845 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 SLC40A1Q9NP59 571 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 COMMD3Q9UBI1 195 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 LOC100506127A0A0U1RQW1 187 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 H7C417 338 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 CLOCKO15516 846 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 CORO1AP31146 461 aaKnown RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 SEC24CP53992 1094 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 HNRNPKP61978 463 aaKnown RBP eCLIP3.37□□□□□ -1.87
NEB-201ENST00000172853 FAM131AQ6UXB0 335 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 MAMDC2Q7Z304 686 aaPredicted RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 C1GALT1C1Q96EU7 318 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 CCSER1Q9C0I3 900 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 GNB4Q9HAV0 340 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 TLR9Q9NR96 1032 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 AGPAT3Q9NRZ7 376 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 ETAA1Q9NY74 926 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 CEMIPQ8WUJ3 1361 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 IFT172Q9UG01 1749 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 CPSF4LA6NMK7 179 aaKnown RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 EOMESO95936 686 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 WNT11O96014 354 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 ZSCAN5DPP0CG00 497 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 ZBTB48P10074 688 aaPredicted RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 ATP1A3P13637 1013 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 ARSFP54793 590 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 SGCAQ16586 387 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 KCNK18Q7Z418 384 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.37□□□□□ -1.87
NEB-201ENST00000172853 MCFD2Q8NI22 146 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 ERMAPQ96PL5 475 aaPredicted RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 CIB1Q99828 191 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 FAM96BQ9Y3D0 163 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 OR2AT4A6NND4 320 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 KCNQ3O43525 872 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 TIMP2P16035 220 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 GOT1P17174 413 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 RTP1P59025 263 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 EXOC3L2Q2M3D2 409 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 TRMT5Q32P41 509 aaKnown RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 PRAMEF19Q5SWL8 479 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 DHDDSQ86SQ9 333 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 PTGR2Q8N8N7 351 aaPredicted RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 SCCPDHQ8NBX0 429 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 DPF2Q92785 391 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 GGHQ92820 318 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 KATNBL1Q9H079 304 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 C19orf12Q9NSK7 152 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 ATP7BP35670 1465 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 ZSCAN5BA6NJL1 495 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 LACTBL1A8MY62 500 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 RNASEK-C17orf49H0YIS7 233 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 EPHB6O15197 1021 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 ANGPTL7O43827 346 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 BCAS2O75934 225 aaPredicted RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 PAX6P26367 422 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 ADGRE1Q14246 886 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 ATAD3CQ5T2N8 411 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 MON1AQ86VX9 555 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 DTX3Q8N9I9 347 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 OR6C4Q8NGE1 309 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 OR14L1PQ8NHC6 308 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 TP53INP1Q96A56 240 aa3.37□□□□□ -1.87
NEB-201ENST00000172853 PTCD3Q96EY7 689 aaKnown RBP3.37□□□□□ -1.87
NEB-201ENST00000172853 ZC3H10Q96K80 434 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms