RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Sult3a1O35403 293 aa15.19■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Usp2O88623 613 aa15.19■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Hcrtr1P58307 416 aa15.19■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Cdk18Q04899 451 aa15.19■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Gm10662Q3UT86 313 aa15.19■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Slco4a1Q8K078 723 aa15.19■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 McmbpQ8R3C0 642 aa15.19■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Pex16Q91XC9 336 aa15.19■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 TympQ99N42 471 aa15.19■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Prps2Q9CS42 318 aa15.19■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Leng1Q9DB98 261 aa15.19■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Gm21319F6YNI8 144 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Gm16427J3QN52 483 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Fkbp7O54998 218 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Rin3P59729 980 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Ncf4P97369 339 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Rasgrp3Q6NZH9 691 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Ces2bQ6PDB7 556 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Kctd12Q6WVG3 327 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Psmd11Q8BG32 422 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Sh2d5Q8JZW5 429 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Scamp1Q8K021 338 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Tspan8Q8R3G9 235 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Golga7Q91W53 137 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Gjd3Q91YD1 278 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Cldn7Q9Z261 211 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Btaf1E9QAE3 1848 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Adh6bA0A1D5RMB0 384 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Gm11239E9Q5Z9 360 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Gm11237F2Z3W5 360 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Gm11238F2Z478 360 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Jak1P52332 1153 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Copz1P61924 177 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Gsk3aQ2NL51 490 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Gm428Q3UTE2 360 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Colgalt2Q6NVG7 625 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Olfr813Q7TRH5 310 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Zbtb24Q80X44 710 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Q8BWQ6 963 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Fam161aQ8QZV6 448 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Olfr1276Q8VF40 312 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Olfr183Q8VFB9 309 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Tspan1Q99J59 240 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Rhox9Q9EQM5 227 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Zfp969A2ART2 485 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Zfp973A2BE20 318 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Gm7945F6QI24 236 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Tulp3O88413 460 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Fgf18O89101 207 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Fv4P11370 679 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Xkr4Q5GH67 647 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Slc25a51Q5HZI9 298 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Serpinb11Q9CQV3 388 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Necab3Q9D6J4 353 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 PgcQ9D7R7 392 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Gde1Q9JL56 331 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Ap1m2Q9WVP1 423 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Clip3B9EHT4 547 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Gm6502L7N456 481 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Ppp1r26Q6A025 1163 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Maml1Q6T264 1020 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Ugt2b1Q8R084 529 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Myl9Q9CQ19 172 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Cops7aQ9CZ04 275 aa15.18■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Vmn2r115E9Q0E7 857 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Gm8906L7N2A2 181 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 MbP04247 154 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Zfp28P10078 825 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Cd40lgP27548 260 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Gna13P27601 377 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Ranbp9P69566 653 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Q3U7U4 132 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 CcnhQ61458 323 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Nr0b2Q62227 260 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Nuak2Q8BZN4 639 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 MmaaQ8C7H1 415 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 RybpQ8CCI5 228 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Abhd11Q8K4F5 307 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Tmem246Q91YV9 403 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Slc25a36Q922G0 311 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Cacna1cQ01815 2139 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Auts2A0A087WPF7 1261 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 BC049352E9Q2Z6 85 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Zfp607bG3X9H3 648 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Cdh3P10287 822 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 H2-Q7P14429 334 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 H2-Q9P14431 200 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 RogdiQ3TDK6 287 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Slc30a1Q60738 503 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Q8C5S3 137 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Amer2Q8CCJ4 672 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 BtdQ8CIF4 520 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Fam129bQ8R1F1 749 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Cops8Q8VBV7 209 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Pcdhb8Q91XZ2 779 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Tmem9Q9CR23 183 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Sec13Q9D1M0 322 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 UqcrbQ9D855 111 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Nek6Q9ES70 313 aa15.17■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 ChmlQ9QZD5 621 aa15.17■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 45.4 ms