RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Arhgef3Q91X46 524 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 ProzQ9CQW3 399 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Prdm5Q9CXE0 599 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Rtl8cQ9D6I0 112 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Vmn2r17E9PYF5 849 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 NsmafO35242 920 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Tnfsf9P41274 309 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Q3UK37 420 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Snta1Q61234 503 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Arl5cQ6P068 179 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Pamr1Q8BU25 720 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Tbc1d17Q8BYH7 645 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Nmur2Q8BZ39 395 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 GnalQ8CGK7 381 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Cbr4Q91VT4 236 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Lrch4Q921G6 680 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Pacsin3Q99JB8 424 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Cd163l1A0A1B0GSB0 991 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Slc9a6A1L3P4 702 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Slc43a3A2AVZ9 502 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Pdlim1O70400 327 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 AboP38649 332 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Cyb5r2Q3KNK3 276 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Kctd21Q3URF8 260 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Il17reQ8BH06 637 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 9530002B09RikQ9EPV7 135 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Calm4Q9JM83 148 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Nfs1Q9Z1J3 459 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 MlxO08609 298 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 AcadvlP50544 656 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Tmem173Q3TBT3 378 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Guk1Q64520 198 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Zswim3Q8CFL8 695 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Traf3ip2Q8N7N6 555 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 McmbpQ8R3C0 642 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 ItpkbB2RXC2 942 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Fam46aD3Z5S8 447 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Wdr95D3Z7A8 784 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Zc3h12bG3X9I7 835 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 CilpQ66K08 1184 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Taf1cQ6PDZ2 836 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Mospd1Q8VEL0 213 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Gon4lQ9DB00 2260 aa10.23□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Dnmt3aO88508 908 aaKnown RBP10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Ctnnb1Q02248 781 aaKnown RBP10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Cdh12Q5RJH3 794 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Spin1Q61142 262 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Sp140Q6NSQ5 534 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 PdprQ7TSQ8 878 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Marc2Q922Q1 338 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Gm16286Q9CQX6 220 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 HephQ9Z0Z4 1157 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Rex2A2AWF2 685 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 1700014D04RikJ3QMS2 983 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 PnpP23492 289 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Hdac2P70288 488 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 RgnQ64374 299 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Prmt6Q6NZB1 378 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Tram1Q91V04 374 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 D6Wsu163eQ91YN0 552 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Slc25a36Q922G0 311 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Sars2Q9JJL8 518 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Rgs1Q9JL25 209 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Gm5565A0A0G2JGB2 317 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Zfp612A0A1D5RMC2 672 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Cdk5r2O35926 369 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Pex2P55098 305 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Q3UTZ3 580 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Olfr1288Q7TQY0 312 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Gabbr2Q80T41 940 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Klhl42Q8BFQ9 493 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Nipal4Q8BZF2 406 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Q8C0X8 640 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Tma7Q8K003 64 aaKnown RBP10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 FgbQ8K0E8 481 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Prrg2Q8R182 198 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Lpin1Q91ZP3 924 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Il20Q9JKV9 176 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 H2afb1S4R1E0 115 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 H2afb3S4R1G7 115 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Gm7682A0A0J9YUM1 481 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Slc6a20bO88575 635 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Adamts15P59384 950 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Col6a2Q02788 1034 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Dennd1bQ3U1T9 766 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Olfr299Q7TS05 330 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Agbl2Q8CDK2 862 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Grhl2Q8K5C0 625 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Slc6a20aQ8VDB9 592 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Alg5Q9DB25 324 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Spock2Q9ER58 423 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Ech1O35459 327 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Emx2Q04744 253 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Nxpe2Q3U095 558 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Mthfd1lQ3V3R1 977 aaKnown RBP10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Ddx51Q6P9R1 639 aaKnown RBP10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Cpne1Q8C166 536 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Zbtb26Q8C8S0 451 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 Hbp1Q8R316 516 aa10.22□□□□□ -0.77
Scn8a-201ENSMUST00000082209 B4galt5Q9JMK0 388 aa10.22□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms