RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Cep76Q0VEJ0 659 aa6.72□□□□□ -1.33
Bdnf-201ENSMUST00000053317 CrxosQ3UL53 246 aa6.72□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Prdm6Q3UZD5 596 aa6.72□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Defb46Q4QY34 57 aa6.72□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Serpina3gQ5I2A0 440 aa6.72□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Nr1d2Q60674 576 aa6.72□□□□□ -1.33
Bdnf-201ENSMUST00000053317 WlsQ6DID7 541 aa6.72□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Gga2Q6P5E6 603 aa6.72□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ttc29Q80VM3 471 aa6.72□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Cstf2Q8BIQ5 580 aaKnown RBP6.72□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Shisa7Q8C3Q5 558 aa6.72□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Mfsd6Q8CBH5 775 aa6.72□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ccdc63Q8CDV6 558 aa6.72□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Nfatc4Q8K120 901 aa6.72□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Vmn1r89Q8R256 316 aa6.72□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Akr1d1Q8VCX1 325 aa6.72□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Impa2Q91UZ5 290 aa6.72□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Q9CQM1 111 aa6.72□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ist1Q9CX00 362 aa6.72□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Wdr5bQ9D7H2 328 aa6.72□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ift43Q9DA69 206 aa6.72□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Znrf4Q9DAH2 327 aa6.72□□□□□ -1.33
Bdnf-201ENSMUST00000053317 KelQ9EQF2 713 aa6.72□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Rnf32Q9JIT1 368 aa6.72□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Med20Q9R0X0 212 aa6.72□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Krt6bQ9Z331 562 aa6.72□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Zfc3h1B2RT41 1992 aaKnown RBP6.71□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Rpl7a-ps3A0A140T8L1 270 aa6.71□□□□□ -1.33
Bdnf-201ENSMUST00000053317 A0A286YD13 301 aa6.71□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Vmn2r24D3YUI0 854 aa6.71□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Gm20828J3KMI7 228 aa6.71□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Vmn1r169L7N275 304 aa6.71□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Akr1c6P70694 323 aa6.71□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Otol1Q4ZJM7 482 aa6.71□□□□□ -1.33
Bdnf-201ENSMUST00000053317 BadQ61337 204 aa6.71□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Drd1Q61616 446 aa6.71□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Kcng4Q80XM3 506 aa6.71□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ubash3bQ8BGG7 638 aa6.71□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Pex26Q8BGI5 305 aa6.71□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Hspa13Q8BM72 471 aa6.71□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Bend7Q8BSV3 434 aa6.71□□□□□ -1.33
Bdnf-201ENSMUST00000053317 MaobQ8BW75 520 aa6.71□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Adi1Q99JT9 179 aa6.71□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Emc3Q99KI3 261 aa6.71□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Q9CQF4 240 aa6.71□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Zswim7Q9CWQ2 152 aa6.71□□□□□ -1.33
Bdnf-201ENSMUST00000053317 AenQ9CZI9 336 aaKnown RBP6.71□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Ogfod3Q9D136 315 aa6.71□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Tomm20lQ9D4V6 152 aa6.71□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Taf8Q9EQH4 308 aa6.71□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Il1rl2Q9ERS7 574 aa6.71□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Pik3cgQ9JHG7 1102 aa6.71□□□□□ -1.33
Bdnf-201ENSMUST00000053317 Gm28961A0A087WPA5 222 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Gm21858A0A087WQ24 222 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Fam83cA2ARK0 776 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 RerglB2RVE2 204 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Olfr741L7N1Y5 311 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 GcatO88986 416 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Il1rl1P14719 567 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 M6prP24668 278 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Plin2P43883 425 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Cpt1aP97742 773 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Fcho2Q3UQN2 809 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 9930111J21Rik1Q5SVP0 844 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ifi47Q61635 420 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Zzz3Q6KAQ7 910 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ube2r2Q6ZWZ2 238 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ints7Q7TQK1 966 aaKnown RBP6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Vps50Q8CI71 964 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Plac9Q8K262 108 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Tceal3Q8R0A5 200 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Sh3glb2Q8R3V5 400 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Olfr606Q8VGZ8 319 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Tspan1Q99J59 240 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Fam136aQ9CR98 138 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Zfp655Q9CZP3 541 aaKnown RBP6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Echdc3Q9D7J9 300 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 EqtnQ9D9V2 337 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Prpf4Q9DAW6 521 aaKnown RBP6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Smok2bQ9QYZ3 484 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Smok2aQ9QYZ6 504 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 H2-BlV9GXR0 257 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Olfr634-ps1A0A1B0GRN7 318 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Tmem236A2ARJ3 344 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Gm2056J3QQ02 144 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Vmn2r45L7N2B5 852 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Cyp1a2P00186 513 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Klf1P46099 358 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 St3gal1P54751 337 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 PrkacbP68181 351 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 InhaQ04997 366 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Dnal1Q05A62 190 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Sec24aQ3U2P1 1090 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Syce1lQ5D525 247 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Abcd2Q61285 741 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Brinp2Q6DFY8 783 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 AptxQ7TQC5 342 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Got1l1Q7TSV6 404 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Cox15Q8BJ03 413 aa6.71□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Cops7bQ8BV13 264 aa6.71□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms