RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Anks3Q9CZK6 655 aa16.38■□□□□ 0.21
Col17a1-201ENSMUST00000026045 5530400C23RikQ9D3I0 173 aa16.38■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Praf2Q9JIG8 178 aa16.38■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Col5a2Q3U962 1497 aa16.38■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Fam131cA2ADB2 273 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Rd3lB2RV38 197 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Vmn1r14H3BJ46 303 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Gnpda1O88958 289 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Ccbe1Q3MI99 408 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Tnfaip8l3Q3TBL6 204 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Sppl2bQ3TD49 578 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Il1rapQ61730 570 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Cpsf6Q6NVF9 551 aaKnown RBP16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Zfp759Q7M6X3 721 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Scamp1Q8K021 338 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Nif3l1Q9EQ80 376 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Spata31d1aE9QA35 1336 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Gm2022A0A1Y7VLT7 144 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Cox4i1P19783 169 aaKnown RBP16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Foxk1P42128 719 aaKnown RBP16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Tead3P70210 439 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Pros1Q08761 675 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 PrkciQ62074 595 aaKnown RBP16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 GmdsQ8K0C9 372 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Slc38a4Q8R1S9 547 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 4930524N10RikQ9D519 233 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Capn5O08688 640 aaKnown RBP16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Npc1O35604 1277 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Dnaja1P63037 397 aaKnown RBP16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Chpt1Q8C025 398 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Slc46a2Q8CA03 479 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Phtf2Q8CB19 747 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Ipo13Q8K0C1 963 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Rbm48Q8K2X2 371 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 AcmsdQ8R519 336 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Mthfd1Q922D8 935 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Slc25a11Q9CR62 314 aaKnown RBP16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Zdhhc21Q9D270 265 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Alg13Q9D8C3 1166 aaKnown RBP16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Zfp969A2ART2 485 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Gm20547B8JJN0 1276 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 KlO35082 1014 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 CfbP04186 761 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Hoxc6P10629 235 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Sult2a1P52843 285 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Mkl2P59759 1080 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Pou4f3Q63955 338 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Lrrtm2Q8BGA3 515 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Nipal4Q8BZF2 406 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Micu2Q8CD10 432 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Efcab7Q8VDY4 628 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Il18rapQ9Z2B1 614 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Sult2a3D3Z1W5 285 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Socs2O35717 198 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Lmo2P25801 158 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Rfx2P48379 717 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Pcbp2Q61990 362 aaKnown RBP16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Txnl4bQ8BUH1 149 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 MslnlQ8C160 685 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Slc25a19Q9DAM5 318 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Scn7aB1AYL1 1681 aa16.37■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Rnf169E9Q7F2 694 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Tnks2Q3UES3 1166 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Gm8332Q3UTA4 144 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Q8R2K8 148 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Mrgpra2Q91WW4 305 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Slamf8Q9D3G2 278 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Upk3bl1Q9D701 249 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Gm17190V9GX38 357 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Gp5O08742 567 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Kcnab2P62482 367 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Fam221bQ8C627 487 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Pnpla8Q8K1N1 776 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Chrna3Q8R4G9 499 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Klhl22Q99JN2 634 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 March2Q99M02 246 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Slamf1Q9QUM4 343 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Bcl9lQ67FY2 1494 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Ptpn9O35239 593 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Ppef1O35655 650 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Hcn4O70507 1186 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 P01740 135 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Serpine1P22777 402 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Adamts10P58459 1104 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Arhgap1Q5FWK3 439 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Lrrc75bQ7TPD7 306 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Acsl6Q91WC3 697 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Mrps2Q924T2 291 aaKnown RBP16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Acss1Q99NB1 682 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Olfr625-ps1A0A140T8L4 321 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Olfr1084A0A1L1STZ9 313 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 CfhP06909 1234 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Slc10a3P21129 473 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Cxcr5Q04683 374 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Eef2kmtQ3UZW7 335 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Serpina3aQ6P4P1 422 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Cnih3Q6ZWS4 160 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Fbxo30Q8BJL1 746 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Vps9d1Q8C190 649 aa16.36■□□□□ 0.21
Col17a1-201ENSMUST00000026045 Fndc5Q8K4Z2 209 aa16.36■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 97 ms