RNA–Protein interactions for RNA: ENST00000641588.1

CASC19-243, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-243ENST00000641588 RPS3P23396 243 aaKnown RBP eCLIP6.78□□□□□ -1.32
CASC19-243ENST00000641588 SDC4P31431 198 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 MTHFRP42898 656 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 MAP2K4P45985 399 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 GSTM5P46439 218 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 ALDH9A1P49189 494 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 CLCNKAP51800 687 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 TKTL1P51854 596 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 BCAT1P54687 386 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 IL5RAQ01344 420 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 EMX2Q04743 252 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 POU5F1BQ06416 359 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 LGALS3BPQ08380 585 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 EIF4HQ15056 248 aaKnown RBP6.78□□□□□ -1.32
CASC19-243ENST00000641588 TRIM60Q495X7 471 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 GPR33Q49SQ1 333 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 TEX30Q5JUR7 227 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 HES5Q5TA89 166 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 LCN1P1Q5VSP4 162 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 CASC4Q6P4E1 433 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 C19orf48Q6RUI8 117 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 METAP1DQ6UB28 335 aaPredicted RBP6.78□□□□□ -1.32
CASC19-243ENST00000641588 LAYNQ6UX15 382 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 SPATA19Q7Z5L4 167 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 RBM23Q86U06 439 aaKnown RBP6.78□□□□□ -1.32
CASC19-243ENST00000641588 CBWD2Q8IUF1 395 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 SIAH1Q8IUQ4 282 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 FUNDC1Q8IVP5 155 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 ZZZ3Q8IYH5 903 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 SYNE4Q8N205 404 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 GPD1LQ8N335 351 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 TAB3Q8N5C8 712 aaPredicted RBP6.78□□□□□ -1.32
CASC19-243ENST00000641588 CAMKVQ8NCB2 501 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 ZNF540Q8NDQ6 660 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 SRFBP1Q8NEF9 429 aaKnown RBP6.78□□□□□ -1.32
CASC19-243ENST00000641588 ITFG1Q8TB96 612 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 AGR3Q8TD06 166 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 ZNF431Q8TF32 576 aaPredicted RBP6.78□□□□□ -1.32
CASC19-243ENST00000641588 UBASH3BQ8TF42 649 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 BTN2A2Q8WVV5 523 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 ARMC5Q96C12 935 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 VPS39Q96JC1 886 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 TEPSINQ96N21 525 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 ZNF670Q9BS34 389 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 C1QTNF1Q9BXJ1 281 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 SMURF1Q9HCE7 757 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 JPH1Q9HDC5 661 aaPredicted RBP6.78□□□□□ -1.32
CASC19-243ENST00000641588 ITM2CQ9NQX7 267 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 SDR39U1Q9NRG7 319 aaPredicted RBP6.78□□□□□ -1.32
CASC19-243ENST00000641588 ANKEF1Q9NU02 776 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 RDH8Q9NYR8 311 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.78□□□□□ -1.32
CASC19-243ENST00000641588 LEF1Q9UJU2 399 aaPredicted RBP6.78□□□□□ -1.32
CASC19-243ENST00000641588 TINAGQ9UJW2 476 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 USP18Q9UMW8 372 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 MAGED2Q9UNF1 606 aaPredicted RBP6.78□□□□□ -1.32
CASC19-243ENST00000641588 DERAQ9Y315 318 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 CDK5RAP2Q96SN8 1893 aa6.78□□□□□ -1.32
CASC19-243ENST00000641588 A0A0A6YYJ9 748 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 IQCMA0A1B0GVH7 501 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 A0A1B0GVI7 797 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 A0A1B0GW55 424 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 A0A1W2PQ09 198 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 ERI2A8K979 691 aaKnown RBP6.77□□□□□ -1.33
CASC19-243ENST00000641588 H7C2Y5 167 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 MEIS2O14770 477 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 ANKRD28O15084 1053 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 SEC22BO75396 215 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 EEDO75530 441 aaKnown RBP6.77□□□□□ -1.33
CASC19-243ENST00000641588 WDR47O94967 919 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 LALBAP00709 142 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 DUX4L2P0CJ85 424 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 DUX4L3P0CJ86 424 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 DUX4L4P0CJ87 422 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 DUX4L5P0CJ88 424 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 DUX4L6P0CJ89 424 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 DUX4L7P0CJ90 424 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 PRKAR1AP10644 381 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 SFTPCP11686 197 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 GADD45AP24522 165 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 S100PP25815 95 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 MIPP30301 263 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 HIBADHP31937 336 aaKnown RBP6.77□□□□□ -1.33
CASC19-243ENST00000641588 CRKP46108 304 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 GYG1P46976 350 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 CLCN5P51795 746 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 MAP2K6P52564 334 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 CDH6P55285 790 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 CLDN20P56880 219 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 PIGFQ07326 219 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 CSTF3Q12996 717 aaKnown RBP6.77□□□□□ -1.33
CASC19-243ENST00000641588 MTM1Q13496 603 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 DGCR6Q14129 220 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 ZNF124Q15973 351 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 TIGD6Q17RP2 521 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 PABPC1L2AQ5JQF8 200 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 RAP1GAP2Q684P5 730 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 HEATR6Q6AI08 1181 aaKnown RBP6.77□□□□□ -1.33
CASC19-243ENST00000641588 ZNF787Q6DD87 383 aa6.77□□□□□ -1.33
CASC19-243ENST00000641588 TMEM270Q6UE05 265 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms