RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 ING3Q9NXR8 418 aa11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 FAM8A1Q9UBU6 413 aa11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 ZNF451Q9Y4E5 1061 aa11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 LTBP2Q14767 1821 aa11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 M0R129 80 aa11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 AREL1O15033 823 aa11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 PDGFAP04085 211 aa11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 CYP2A6P11509 494 aaPredicted RBP11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 HTR3AP46098 478 aa11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 TPI1P60174 286 aa11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 STARD3Q14849 445 aa11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 AGAP9Q5VTM2 703 aa11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 FAM122CQ6P4D5 195 aa11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 HDDC2Q7Z4H3 204 aa11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 ZBTB44Q8NCP5 570 aa11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 SLC47A1Q96FL8 570 aa11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 C3orf30Q96M34 536 aa11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 TM9SF2Q99805 663 aa11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 UQCC2Q9BRT2 126 aa11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 HDHD2Q9H0R4 259 aa11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 ATP13A2Q9NQ11 1180 aa11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 DNMT3BQ9UBC3 853 aaKnown RBP11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 TRMT6Q9UJA5 497 aaKnown RBP11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 UTS2RQ9UKP6 389 aa11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 TMPRSS11EQ9UL52 423 aa11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 RNF6Q9Y252 685 aa11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 EYSQ5T1H1 3165 aa11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 SHROOM3Q8TF72 1996 aa11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 PTPRSQ13332 1948 aa11.57□□□□□ -0.56
RBFOX1-224ENST00000641259 NYNRINQ9P2P1 1898 aaKnown RBP11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 PTTG1O95997 202 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 PROS1P07225 676 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 ANXA6P08133 673 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 POU2F1P14859 743 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 ENPP1P22413 925 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 SLC6A2P23975 617 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 DEFB103AP81534 67 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 RPA4Q13156 261 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 GRM7Q14831 915 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 ZNF181Q2M3W8 571 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 PLEKHG6Q3KR16 790 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 C5orf22Q49AR2 442 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 TIFABQ6ZNK6 161 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 RBM23Q86U06 439 aaKnown RBP11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 CPSF7Q8N684 471 aaKnown RBP11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 SPATA22Q8NHS9 363 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 SNX18Q96RF0 628 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 HOPXQ9BPY8 73 aaPredicted RBP11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 TNFRSF12AQ9NP84 129 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 DYRK4Q9NR20 520 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 CPB1P15086 417 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 LBPP18428 481 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 ATF6P18850 670 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 NFKB1P19838 968 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 AQP1P29972 269 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 UFM1P61960 85 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 SNTA1Q13424 505 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 GPR158Q5T848 1215 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 SLC16A12Q6ZSM3 486 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 GLCCI1Q86VQ1 547 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 ZNF567Q8N184 647 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 GHDCQ8N2G8 530 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 SLC5A11Q8WWX8 675 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 NUP205Q92621 2012 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 SEPT5Q99719 369 aaPredicted RBP11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 FARSBQ9NSD9 589 aaKnown RBP11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 ABCC13Q9NSE7 274 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 GLTPQ9NZD2 209 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 INTS6Q9UL03 887 aaKnown RBP11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 PCDHB5Q9Y5E4 795 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 KDM4BO94953 1096 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 AHSGP02765 367 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 CA5AP35218 305 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 CTSKP43235 329 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 DUSP4Q13115 394 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 RFTN1Q14699 578 aaPredicted RBP11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 ESRP1Q6NXG1 681 aaKnown RBP11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 CEP97Q8IW35 865 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 DCP1BQ8IZD4 617 aaKnown RBP11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 PEX13Q92968 403 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 PTERQ96BW5 349 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 MAGEB10Q96LZ2 347 aaPredicted RBP11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 ZFP14Q9HCL3 533 aa11.56□□□□□ -0.56
RBFOX1-224ENST00000641259 PAGE1O75459 146 aa11.55□□□□□ -0.56
RBFOX1-224ENST00000641259 MOCS2O96007 188 aaPredicted RBP11.55□□□□□ -0.56
RBFOX1-224ENST00000641259 ATP6V0D1P61421 351 aa11.55□□□□□ -0.56
RBFOX1-224ENST00000641259 C2orf80Q0P641 193 aa11.55□□□□□ -0.56
RBFOX1-224ENST00000641259 NR6A1Q15406 480 aa11.55□□□□□ -0.56
RBFOX1-224ENST00000641259 ALFQ53S48 1182 aa11.55□□□□□ -0.56
RBFOX1-224ENST00000641259 RBM20Q5T481 1227 aaKnown RBP11.55□□□□□ -0.56
RBFOX1-224ENST00000641259 KBTBD8Q8NFY9 601 aa11.55□□□□□ -0.56
RBFOX1-224ENST00000641259 OR52J3Q8NH60 311 aa11.55□□□□□ -0.56
RBFOX1-224ENST00000641259 TWIST2Q8WVJ9 160 aa11.55□□□□□ -0.56
RBFOX1-224ENST00000641259 TRIM43Q96BQ3 446 aaPredicted RBP11.55□□□□□ -0.56
RBFOX1-224ENST00000641259 FUBP3Q96I24 572 aaKnown RBP eCLIP11.55□□□□□ -0.56
RBFOX1-224ENST00000641259 REXO5Q96IC2 774 aaKnown RBP11.55□□□□□ -0.56
RBFOX1-224ENST00000641259 DOK1Q99704 481 aa11.55□□□□□ -0.56
RBFOX1-224ENST00000641259 SPATA6Q9NWH7 488 aaPredicted RBP11.55□□□□□ -0.56
RBFOX1-224ENST00000641259 SCML2Q9UQR0 700 aa11.55□□□□□ -0.56
RBFOX1-224ENST00000641259 IPO13O94829 963 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms