RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	OAZ2	O95190	189 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	AHSG	P02765	367 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	ANXA6	P08133	673 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	ZNF250	P15622	560 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	POU3F3	P20264	500 aa	Predicted RBP	10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	CAPN3	P20807	821 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	CD72	P21854	359 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	HRH2	P25021	359 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	PTPN3	P26045	913 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	HOXC13	P31276	330 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	PIGA	P37287	484 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	HAAO	P46952	286 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	MAPKAPK2	P49137	400 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	TPMT	P51580	245 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	GBX2	P52951	348 aa	Predicted RBP	10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	PER3	P56645	1201 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	FAM189B	P81408	668 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	GRIK2	Q13002	908 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	FBXO43	Q4G163	708 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	CLLU1	Q5K131	121 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	ANKS3	Q6ZW76	656 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	SLC46A3	Q7Z3Q1	461 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	TMEM135	Q86UB9	458 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	CUZD1	Q86UP6	607 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	OR9I1	Q8NGQ6	314 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	HASPIN	Q8TF76	798 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	EDEM1	Q92611	657 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	AKAP1	Q92667	903 aa	Known RBP eCLIP	10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	MSANTD3	Q96H12	275 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	LRCH3	Q96II8	777 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	TSGA13	Q96PP4	275 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	SIGLEC11	Q96RL6	698 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	HDHD5	Q9BXW7	423 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	RHOJ	Q9H4E5	214 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	RNF121	Q9H920	327 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	CAB39L	Q9H9S4	337 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	SMURF2	Q9HAU4	748 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	ZBTB20	Q9HC78	741 aa	Predicted RBP	10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	HMX1	Q9NP08	348 aa	Predicted RBP	10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	RNF186	Q9NXI6	227 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	ACOT9	Q9Y305	439 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	AAR2	Q9Y312	384 aa	Known RBP	10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	PCDHB5	Q9Y5E4	795 aa		10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	OAS3	Q9Y6K5	1087 aa	Known RBP	10.5	□□□□□ -0.73
CHD2-223	ENST00000636306	ZNF638	Q14966	1978 aa	Known RBP	10.5	□□□□□ -0.73
CHD2-223	ENST00000636306		A0A087X1B8	175 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306		A0A1W2PQ45	241 aa	Predicted RBP	10.49	□□□□□ -0.73
CHD2-223	ENST00000636306		A0A1W2PQY0	241 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	AKR7A2	O43488	359 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	ANXA9	O76027	345 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	PAPSS2	O95340	614 aa	Predicted RBP	10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	FADS2	O95864	444 aa	Known RBP	10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	OLFM2	O95897	454 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	IFNA14	P01570	189 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	SELP	P16109	830 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	RAB3A	P20336	220 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	OR1G1	P47890	313 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	KCNC1	P48547	511 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	LIMK1	P53667	647 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	ERVK-21	P61565	698 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	CYP4F2	P78329	520 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	UBE3A	Q05086	875 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	CYP4F3	Q08477	520 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	DBP	Q10586	325 aa	Predicted RBP	10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	MAB21L1	Q13394	359 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	NFYC	Q13952	458 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	DGCR6	Q14129	220 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	CAPRIN1	Q14444	709 aa	Known RBP	10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	QPRT	Q15274	297 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	KIF19	Q2TAC6	998 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	PYCR3	Q53H96	274 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	MSANTD2	Q6P1R3	559 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	TMEM81	Q6P7N7	255 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	TXNDC11	Q6PKC3	985 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	CD300LG	Q6UXG3	332 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	LRRC8D	Q7L1W4	858 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	COMMD7	Q86VX2	200 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	HIPK1	Q86Z02	1210 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	GDPD1	Q8N9F7	314 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	DNAAF3	Q8N9W5	541 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	OR8H1	Q8NGG4	311 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	ZNF669	Q96BR6	464 aa	Predicted RBP	10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	MOCOS	Q96EN8	888 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	AHCYL2	Q96HN2	611 aa	Known RBP	10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	CAPNS2	Q96L46	248 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	SAMD11	Q96NU1	681 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	FCRL3	Q96P31	734 aa	Predicted RBP	10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	GPR78	Q96P69	363 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	TRNT1	Q96Q11	434 aa	Known RBP	10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	PAK6	Q9NQU5	681 aa	Predicted RBP	10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	KIF17	Q9P2E2	1029 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	XPR1	Q9UBH6	696 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	SLC39A10	Q9ULF5	831 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	SCML2	Q9UQR0	700 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	MFHAS1	Q9Y4C4	1052 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306		A0A1W2PP18	115 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	SLC35F4	A4IF30	521 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306	FAM170B	A6NMN3	283 aa		10.49	□□□□□ -0.73
CHD2-223	ENST00000636306		B4DXG7	233 aa		10.49	□□□□□ -0.73

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