RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 GPR42O15529 346 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 ATP6AP2O75787 350 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 DNAJC8O75937 253 aaPredicted RBP7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 CBX6O95503 412 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 PRR35P0CG20 571 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 T-ENOLP0DO92 83 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 THRAP10827 490 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 CTSEP14091 401 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 SLC2A4P14672 509 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 IDO1P14902 403 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 PCSK2P16519 638 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 CD38P28907 300 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 ACTR1BP42025 376 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 MRPL19P49406 292 aaKnown RBP7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 CORO7P57737 925 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 ACTR1AP61163 376 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 NCALDP61601 193 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 ERVK-8P63133 956 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 RACK1P63244 317 aaKnown RBP7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 ACTN3Q08043 901 aaPredicted RBP7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 KLF10Q13118 480 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 PRKG2Q13237 762 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 MAD2L1Q13257 205 aaPredicted RBP7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 LAPTM5Q13571 262 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 DOC2AQ14183 400 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 E2F2Q14209 437 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 FZD2Q14332 565 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 GRB7Q14451 532 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 CLCA4Q14CN2 919 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 NAA25Q14CX7 972 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 HERC3Q15034 1050 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 NR6A1Q15406 480 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 MAPRE2Q15555 327 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 ZRSR2Q15696 482 aaKnown RBP7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 RPE65Q16518 533 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 CPSF6Q16630 551 aaKnown RBP eCLIP7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 HIST2H2ACQ16777 129 aaPredicted RBP7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 IMPG1Q17R60 797 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 ATP6AP1LQ52LC2 224 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 XKR6Q5GH73 641 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 PAGE2BQ5JRK9 111 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 WDR45BQ5MNZ6 344 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 PRAMEF14Q5SWL7 426 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 THEMIS2Q5TEJ8 643 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 PRAMEF13Q5VWM6 474 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 TMEM198Q66K66 360 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 ATG9BQ674R7 924 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 CWF19L1Q69YN2 538 aaKnown RBP7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 HIST2H2AA3Q6FI13 130 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 TRIM46Q7Z4K8 759 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 BMP8AQ7Z5Y6 402 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 C11orf74Q86VG3 221 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 WDR5BQ86VZ2 330 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 TREML1Q86YW5 311 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 LRRC56Q8IYG6 542 aaPredicted RBP7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 FRMD1Q8N878 549 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 PPFIBP2Q8ND30 876 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 OR2L8Q8NGY9 312 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 HMGCLL1Q8TB92 370 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 GPBAR1Q8TDU6 330 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 SMPDL3AQ92484 453 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 USP7Q93009 1102 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 KLHL29Q96CT2 875 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 KCTD12Q96CX2 325 aaKnown RBP7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 REPS1Q96D71 796 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 WDR34Q96EX3 536 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 PRR11Q96HE9 360 aaPredicted RBP7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 SLC6A18Q96N87 628 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 CAMK1GQ96NX5 476 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 OR4K3Q96R72 315 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 EFCAB11Q9BUY7 163 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 TMEM168Q9H0V1 697 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 DUSP15Q9H1R2 295 aaPredicted RBP7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 LRMDAQ9H2I8 198 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 EHD1Q9H4M9 534 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 ELOVL6Q9H5J4 265 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 KIR3DX1Q9H7L2 352 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 PRDM8Q9NQV8 689 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 ARL8BQ9NVJ2 186 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 SPATA6Q9NWH7 488 aaPredicted RBP7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 TBC1D29Q9UFV1 150 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 CIDEBQ9UHD4 219 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 ZNF490Q9ULM2 529 aaPredicted RBP7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 INVSQ9Y283 1065 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 RRP15Q9Y3B9 282 aaKnown RBP7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 PCDHGA11Q9Y5H2 935 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 CFAP20Q9Y6A4 193 aaKnown RBP7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 MUC6Q6W4X9 2439 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 LRRK1Q38SD2 2015 aa7.3□□□□□ -1.24
PTP4A1-206ENST00000627002 KIR2DS5A0A0G2JLQ3 304 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 A0A0G2JNG1 304 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 A0A1W2PR77 199 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 OR5K4A6NMS3 321 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 OR52A4PA6NMU1 304 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 KIR2DS3K7RE56 304 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 TLR4O00206 839 aa7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 PSMD12O00232 456 aaPredicted RBP7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 LSM1O15116 133 aaKnown RBP7.29□□□□□ -1.24
PTP4A1-206ENST00000627002 LAMTOR5O43504 91 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms