RNA–Protein interactions for RNA: ENST00000626315.1

SCARNA15.3-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 122 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.3-201ENST00000626315 MMP12P39900 470 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 CD79BP40259 229 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 KPNA2P52292 529 aaKnown RBP2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 CHN2P52757 468 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 RAG2P55895 527 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 WNT3P56703 355 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 GPR85P60893 370 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 POLR2LP62875 67 aaKnown RBP2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 PHC1P78364 1004 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 MAMLD1Q13495 774 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 GRM3Q14832 879 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 SLC10A1Q14973 349 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 SLC14A2Q15849 920 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 MUM1Q2TAK8 710 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 ZNF699Q32M78 642 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 P3H1Q32P28 736 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 TSGA10IPQ3SY00 556 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 ZC3H12AQ5D1E8 599 aaKnown RBP2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 FIGNQ5HY92 759 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 RAB41Q5JT25 222 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 TCHHL1Q5QJ38 904 aaPredicted RBP2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 SERTAD4-AS1Q5TG53 156 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 SAXO2Q658L1 398 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 BRAT1Q6PJG6 821 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 CRTC3Q6UUV7 619 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 BHLHA9Q7RTU4 235 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 JAZF1Q86VZ6 243 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 RCOR2Q8IZ40 523 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 PELI3Q8N2H9 469 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 AOPEPQ8N6M6 819 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 SIGLECL1Q8N7X8 197 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 NANPQ8TBE9 248 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 TAF15Q92804 592 aaKnown RBP eCLIP2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 NTAN1Q96AB6 310 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 MMABQ96EY8 250 aaPredicted RBP2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 MARS2Q96GW9 593 aaKnown RBP2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 MAP6Q96JE9 813 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 MARK4Q96L34 752 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 KRT12Q99456 494 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 LYSTQ99698 3801 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 GPA33Q99795 319 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 MESP1Q9BRJ9 268 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 SFXN3Q9BWM7 321 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 YIPF2Q9BWQ6 316 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 NT5C1AQ9BXI3 368 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 CACNG6Q9BXT2 260 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 RNF26Q9BY78 433 aaPredicted RBP2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 SUV39H2Q9H5I1 410 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 ATP13A3Q9H7F0 1226 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 MMP25Q9NPA2 562 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 SLC22A11Q9NSA0 550 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 UBP1Q9NZI7 540 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 SLC17A7Q9P2U7 560 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 CTSFQ9UBX1 484 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 ZNF282Q9UDV7 671 aaPredicted RBP2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 VANGL2Q9ULK5 521 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 EXOC7Q9UPT5 735 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 DRG1Q9Y295 367 aaKnown RBP2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 SPEF1Q9Y4P9 236 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 WIF1Q9Y5W5 379 aa2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.77□□□□□ -1.97
SCARNA15.3-201ENST00000626315 CHD5Q8TDI0 1954 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 TRGV5A0A0B4J1U4 118 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 KLF18A0A0U1RQI7 1052 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 ATP6AP2A0A1C7CYW4 349 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 GTPBP10A4D1E9 387 aaKnown RBP2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 LRP5LA4QPB2 252 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 DNAJC9-AS1A6NH13 148 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 ZNF233A6NK53 670 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 OR52A4PA6NMU1 304 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 NDC80O14777 642 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 KLF4O43474 513 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 B4GALT2O60909 372 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 LILRA1O75019 489 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 ERLIN1O75477 346 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 ATP6AP2O75787 350 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 SNUPNO95149 360 aaKnown RBP2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 NGFP01138 241 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 IGHG3P01860 377 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 CD3EP07766 207 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 FBXO45P0C2W1 286 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 ZGLP1P0C6A0 271 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 DLATP10515 647 aaKnown RBP2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 RHOQP17081 205 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 GAP43P17677 238 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 TFE3P19532 575 aaPredicted RBP2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 MGAT1P26572 445 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 OR1E1P30953 314 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 CCR1P32246 355 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 BCL6P41182 706 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 PCYT1AP49585 367 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 CLCNKAP51800 687 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 NR0B1P51843 470 aaKnown RBP2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 EFNA4P52798 201 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 ITGA8P53708 1063 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 MYL6P60660 151 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 KCNJ2P63252 427 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 TMPRSS15P98073 1019 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 ADIGQ0VDE8 80 aa2.76□□□□□ -1.97
SCARNA15.3-201ENST00000626315 MTA1Q13330 715 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms