RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 CPA6Q8N4T0 437 aa4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 FAM86B1Q8N7N1 296 aa4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 NAT16Q8N8M0 369 aa4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 FAM181AQ8N9Y4 354 aa4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 OR2T29Q8NH02 315 aa4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 OR10A6Q8NH74 314 aa4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 RPL3LQ92901 407 aaKnown RBP4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 PYCR2Q96C36 320 aa4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 HRASLS5Q96KN8 279 aa4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 PPM1MQ96MI6 270 aa4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 COL21A1Q96P44 957 aa4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 ZBTB18Q99592 522 aa4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 SMOQ99835 787 aa4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 KRTAP4-9Q9BYQ8 210 aa4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 REXO4Q9GZR2 422 aaKnown RBP4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 RACGAP1Q9H0H5 632 aa4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 PIF1Q9H611 641 aa4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 C12orf10Q9HB07 376 aa4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 GOLGA2P5Q9HBQ8 144 aa4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 CSNK1G1Q9HCP0 422 aa4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 SEMA4BQ9NPR2 832 aaPredicted RBP4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 DDX28Q9NUL7 540 aaKnown RBP4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 C1orf109Q9NX04 203 aa4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 TAS2R13Q9NYV9 303 aa4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 UBA2Q9UBT2 640 aaPredicted RBP4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 KCNN3Q9UGI6 736 aa4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 CPA4Q9UI42 421 aa4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 PSORS1C1Q9UIG5 152 aa4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 PNMA8BQ9ULN7 279 aaPredicted RBP4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 SAMD4AQ9UPU9 718 aaKnown RBP4.07□□□□□ -1.76
PTP4A1-205ENST00000626021 A0A1B0GTL3 188 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 SMIM28A0A1B0GU29 152 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 A8MVJ9 347 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 B8ZZF3 427 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 H3BQ06 376 aaPredicted RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 DFFAO00273 331 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 SLC28A1O00337 649 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 E2F3O00716 465 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 DUSP11O75319 330 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 RPP40O75818 363 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 RECQL4O94761 1208 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 SLITRK5O94991 958 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 OR4F21O95013 312 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 PEX11BO96011 259 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 LCKP06239 509 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 MMP2P08253 660 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 DBTP11182 482 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 G6PDP11413 515 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 IL7P13232 177 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 CYBAP13498 195 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 HLA-DPA1P20036 260 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 GADD45AP24522 165 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 PRDX3P30048 256 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 IFNA8P32881 189 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 CASP2P42575 452 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 SLC15A1P46059 708 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 LHX1P48742 406 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 ALDH9A1P49189 494 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 ARSDP51689 593 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 CRYBB1P53674 252 aaPredicted RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 MAP3K7CLP57077 242 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 RACK1P63244 317 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 PURAQ00577 322 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 FPGSQ05932 587 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 PCDH1Q08174 1060 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 NPRL3Q12980 569 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 LAPTM5Q13571 262 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 SIM2Q14190 667 aaPredicted RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 MAPKAPK3Q16644 382 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 DDR2Q16832 855 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 TIGD6Q17RP2 521 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 BCL7AQ4VC05 210 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 CARD16Q5EG05 197 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 CEP78Q5JTW2 689 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 FAHD1Q6P587 224 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 ZNF517Q6ZMY9 492 aaPredicted RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 GDPGP1Q6ZNW5 385 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 IDO2Q6ZQW0 420 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 MSANTD1Q6ZTZ1 278 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 RNF130Q86XS8 419 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 P3H2Q8IVL5 708 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 ZDHHC21Q8IVQ6 265 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 MSRB3Q8IXL7 192 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 TCTE3Q8IZS6 198 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 FAM9CQ8IZT9 166 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 RDH10Q8IZV5 341 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 NLGN4XQ8N0W4 816 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 TMEM86AQ8N2M4 240 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 BEND7Q8N7W2 519 aaPredicted RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 RTL3Q8N8U3 475 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 ZMIZ2Q8NF64 920 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 OR6P1Q8NGX9 317 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 OR4L1Q8NH43 312 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 BRSK1Q8TDC3 778 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 NETO1Q8TDF5 533 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 APH1BQ8WW43 257 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 SLC13A3Q8WWT9 602 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 JPH3Q8WXH2 748 aaPredicted RBP4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 SLC7A6Q92536 515 aa4.06□□□□□ -1.76
PTP4A1-205ENST00000626021 EXT2Q93063 718 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms