RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 YIPF2Q9BWQ6 316 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 LUC7LQ9NQ29 371 aaKnown RBP14.02□□□□□ -0.17
PNKP-218ENST00000625299 IL1RAPL1Q9NZN1 696 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 ABI3Q9P2A4 366 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 STOX2Q9P2F5 926 aaPredicted RBP14.02□□□□□ -0.17
PNKP-218ENST00000625299 ZNF282Q9UDV7 671 aaPredicted RBP14.02□□□□□ -0.17
PNKP-218ENST00000625299 FEZ2Q9UHY8 353 aaPredicted RBP14.02□□□□□ -0.17
PNKP-218ENST00000625299 CPAMD8Q8IZJ3 1885 aa14.01□□□□□ -0.17
PNKP-218ENST00000625299 MTORP42345 2549 aa14.01□□□□□ -0.17
PNKP-218ENST00000625299 CACNA1CQ13936 2221 aa14.01□□□□□ -0.17
PNKP-218ENST00000625299 HYKKA2RU49 373 aa14.01□□□□□ -0.17
PNKP-218ENST00000625299 C19orf84I3L1E1 186 aa14.01□□□□□ -0.17
PNKP-218ENST00000625299 FFAR3O14843 346 aa14.01□□□□□ -0.17
PNKP-218ENST00000625299 GPR42O15529 346 aa14.01□□□□□ -0.17
PNKP-218ENST00000625299 DIAPH2O60879 1101 aa14.01□□□□□ -0.17
PNKP-218ENST00000625299 WFS1O76024 890 aa14.01□□□□□ -0.17
PNKP-218ENST00000625299 MED26O95402 600 aa14.01□□□□□ -0.17
PNKP-218ENST00000625299 OR56A5P0C7T3 313 aa14.01□□□□□ -0.17
PNKP-218ENST00000625299 FBLP22087 321 aaKnown RBP14.01□□□□□ -0.17
PNKP-218ENST00000625299 CXCR2P25025 360 aa14.01□□□□□ -0.17
PNKP-218ENST00000625299 MSNP26038 577 aaKnown RBP14.01□□□□□ -0.17
PNKP-218ENST00000625299 SSTR2P30874 369 aa14.01□□□□□ -0.17
PNKP-218ENST00000625299 KRTAP10-9P60411 292 aa14.01□□□□□ -0.17
PNKP-218ENST00000625299 PLOD1Q02809 727 aaPredicted RBP14.01□□□□□ -0.17
PNKP-218ENST00000625299 HSPA14Q0VDF9 509 aa14.01□□□□□ -0.17
PNKP-218ENST00000625299 ITIH4Q14624 930 aa14.01□□□□□ -0.17
PNKP-218ENST00000625299 DNAJC21Q5F1R6 531 aaKnown RBP14.01□□□□□ -0.17
PNKP-218ENST00000625299 HIBCHQ6NVY1 386 aaPredicted RBP14.01□□□□□ -0.17
PNKP-218ENST00000625299 DARS2Q6PI48 645 aaKnown RBP14.01□□□□□ -0.17
PNKP-218ENST00000625299 XKRXQ6PP77 449 aa14.01□□□□□ -0.17
PNKP-218ENST00000625299 ACTL9Q8TC94 416 aa14.01□□□□□ -0.17
PNKP-218ENST00000625299 HAS2Q92819 552 aa14.01□□□□□ -0.17
PNKP-218ENST00000625299 NHEJ1Q9H9Q4 299 aaPredicted RBP14.01□□□□□ -0.17
PNKP-218ENST00000625299 ZC3H7BQ9UGR2 993 aaKnown RBP14.01□□□□□ -0.17
PNKP-218ENST00000625299 TINAGQ9UJW2 476 aa14.01□□□□□ -0.17
PNKP-218ENST00000625299 SLC39A10Q9ULF5 831 aa14.01□□□□□ -0.17
PNKP-218ENST00000625299 ALG6Q9Y672 507 aa14.01□□□□□ -0.17
PNKP-218ENST00000625299 FAM169AQ9Y6X4 670 aa14.01□□□□□ -0.17
PNKP-218ENST00000625299 NF1P21359 2839 aa14□□□□□ -0.17
PNKP-218ENST00000625299 A0A0J9YVX5 310 aa14□□□□□ -0.17
PNKP-218ENST00000625299 FITM1A5D6W6 292 aa14□□□□□ -0.17
PNKP-218ENST00000625299 OR1I1O60431 355 aa14□□□□□ -0.17
PNKP-218ENST00000625299 SLC19A2O60779 497 aa14□□□□□ -0.17
PNKP-218ENST00000625299 CTSVO60911 334 aa14□□□□□ -0.17
PNKP-218ENST00000625299 WDPCPO95876 746 aa14□□□□□ -0.17
PNKP-218ENST00000625299 RPN2P04844 631 aa14□□□□□ -0.17
PNKP-218ENST00000625299 SERPINA7P05543 415 aa14□□□□□ -0.17
PNKP-218ENST00000625299 RBP3P10745 1247 aa14□□□□□ -0.17
PNKP-218ENST00000625299 FDXRP22570 491 aa14□□□□□ -0.17
PNKP-218ENST00000625299 SMSP52788 366 aa14□□□□□ -0.17
PNKP-218ENST00000625299 EIF3EP60228 445 aaKnown RBP14□□□□□ -0.17
PNKP-218ENST00000625299 ADORA2A-AS1P86434 159 aa14□□□□□ -0.17
PNKP-218ENST00000625299 C3AR1Q16581 482 aa14□□□□□ -0.17
PNKP-218ENST00000625299 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14□□□□□ -0.17
PNKP-218ENST00000625299 ATG9BQ674R7 924 aa14□□□□□ -0.17
PNKP-218ENST00000625299 FRMPD2BQ6IN97 320 aa14□□□□□ -0.17
PNKP-218ENST00000625299 PACS1Q6VY07 963 aa14□□□□□ -0.17
PNKP-218ENST00000625299 CDH24Q86UP0 819 aa14□□□□□ -0.17
PNKP-218ENST00000625299 VRK3Q8IV63 474 aa14□□□□□ -0.17
PNKP-218ENST00000625299 DCUN1D3Q8IWE4 304 aa14□□□□□ -0.17
PNKP-218ENST00000625299 STYXQ8WUJ0 223 aa14□□□□□ -0.17
PNKP-218ENST00000625299 KRT35Q92764 455 aa14□□□□□ -0.17
PNKP-218ENST00000625299 SPATA13Q96N96 652 aa14□□□□□ -0.17
PNKP-218ENST00000625299 PPP1R2P1Q96PQ5 205 aa14□□□□□ -0.17
PNKP-218ENST00000625299 DNAJC7Q99615 494 aa14□□□□□ -0.17
PNKP-218ENST00000625299 MENTQ9BUN1 341 aa14□□□□□ -0.17
PNKP-218ENST00000625299 ARNT2Q9HBZ2 717 aa14□□□□□ -0.17
PNKP-218ENST00000625299 FAM227AF5H4B4 570 aa13.99□□□□□ -0.17
PNKP-218ENST00000625299 PRICKLE3O43900 615 aaPredicted RBP13.99□□□□□ -0.17
PNKP-218ENST00000625299 NRP2O60462 931 aa13.99□□□□□ -0.17
PNKP-218ENST00000625299 PRAMEF2O60811 474 aa13.99□□□□□ -0.17
PNKP-218ENST00000625299 BMP10O95393 424 aa13.99□□□□□ -0.17
PNKP-218ENST00000625299 ERVK-10P10266 1014 aa13.99□□□□□ -0.17
PNKP-218ENST00000625299 PSMB5P28074 263 aa13.99□□□□□ -0.17
PNKP-218ENST00000625299 EMP2P54851 167 aa13.99□□□□□ -0.17
PNKP-218ENST00000625299 CDSNQ15517 529 aa13.99□□□□□ -0.17
PNKP-218ENST00000625299 PRMT9Q6P2P2 845 aa13.99□□□□□ -0.17
PNKP-218ENST00000625299 LAPTM4BQ86VI4 370 aa13.99□□□□□ -0.17
PNKP-218ENST00000625299 CEP97Q8IW35 865 aa13.99□□□□□ -0.17
PNKP-218ENST00000625299 SLC22A15Q8IZD6 547 aa13.99□□□□□ -0.17
PNKP-218ENST00000625299 AMER2Q8N7J2 671 aa13.99□□□□□ -0.17
PNKP-218ENST00000625299 OR2L8Q8NGY9 312 aa13.99□□□□□ -0.17
PNKP-218ENST00000625299 DNAJB8Q8NHS0 232 aa13.99□□□□□ -0.17
PNKP-218ENST00000625299 CHTF18Q8WVB6 975 aa13.99□□□□□ -0.17
PNKP-218ENST00000625299 MTFMTQ96DP5 389 aaKnown RBP13.99□□□□□ -0.17
PNKP-218ENST00000625299 MAGED4Q96JG8 741 aa13.99□□□□□ -0.17
PNKP-218ENST00000625299 ZNF285Q96NJ3 590 aa13.99□□□□□ -0.17
PNKP-218ENST00000625299 MIPEPQ99797 713 aa13.99□□□□□ -0.17
PNKP-218ENST00000625299 ABHD10Q9NUJ1 306 aa13.99□□□□□ -0.17
PNKP-218ENST00000625299 RIC8BQ9NVN3 520 aa13.99□□□□□ -0.17
PNKP-218ENST00000625299 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.99□□□□□ -0.17
PNKP-218ENST00000625299 NCOA6Q14686 2063 aaPredicted RBP13.99□□□□□ -0.17
PNKP-218ENST00000625299 LOC105369274A0A096LPK9 316 aa13.98□□□□□ -0.17
PNKP-218ENST00000625299 IGHV1-45A0A0A0MS14 117 aa13.98□□□□□ -0.17
PNKP-218ENST00000625299 LOC102723532A0A0G2JNH3 316 aa13.98□□□□□ -0.17
PNKP-218ENST00000625299 CCDC162PA2VCL2 907 aa13.98□□□□□ -0.17
PNKP-218ENST00000625299 OR5H15A6NDH6 313 aa13.98□□□□□ -0.17
PNKP-218ENST00000625299 IDSB3KWA1 339 aa13.98□□□□□ -0.17
PNKP-218ENST00000625299 RASGRF2O14827 1237 aa13.98□□□□□ -0.17
PNKP-218ENST00000625299 SRPX2O60687 465 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms