RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 OR4K3Q96R72 315 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 ZNF382Q96SR6 550 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 PNPOQ9NVS9 261 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 STK38LQ9Y2H1 464 aa17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.24■□□□□ 0.35
PTCHD3-202ENST00000622555 A0A1B0GTL3 188 aa17.23■□□□□ 0.35
PTCHD3-202ENST00000622555 EPORP19235 508 aa17.23■□□□□ 0.35
PTCHD3-202ENST00000622555 C14orf28Q4W4Y0 310 aa17.23■□□□□ 0.35
PTCHD3-202ENST00000622555 PLA2G2CQ5R387 149 aa17.23■□□□□ 0.35
PTCHD3-202ENST00000622555 PRAMEF13Q5VWM6 474 aa17.23■□□□□ 0.35
PTCHD3-202ENST00000622555 TMEM26Q6ZUK4 368 aa17.23■□□□□ 0.35
PTCHD3-202ENST00000622555 SYVN1Q86TM6 617 aa17.23■□□□□ 0.35
PTCHD3-202ENST00000622555 ZNF761Q86XN6 746 aaPredicted RBP17.23■□□□□ 0.35
PTCHD3-202ENST00000622555 DCBLD1Q8N8Z6 715 aa17.23■□□□□ 0.35
PTCHD3-202ENST00000622555 GPR156Q8NFN8 814 aa17.23■□□□□ 0.35
PTCHD3-202ENST00000622555 HMGCLL1Q8TB92 370 aa17.23■□□□□ 0.35
PTCHD3-202ENST00000622555 THOC1Q96FV9 657 aaKnown RBP17.23■□□□□ 0.35
PTCHD3-202ENST00000622555 CDK15Q96Q40 435 aa17.23■□□□□ 0.35
PTCHD3-202ENST00000622555 MIPEPQ99797 713 aa17.23■□□□□ 0.35
PTCHD3-202ENST00000622555 TNFRSF12AQ9NP84 129 aa17.23■□□□□ 0.35
PTCHD3-202ENST00000622555 NLGN3Q9NZ94 848 aa17.23■□□□□ 0.35
PTCHD3-202ENST00000622555 ZDHHC2Q9UIJ5 367 aa17.23■□□□□ 0.35
PTCHD3-202ENST00000622555 DYRK1BQ9Y463 629 aa17.23■□□□□ 0.35
PTCHD3-202ENST00000622555 RETP07949 1114 aa17.22■□□□□ 0.35
PTCHD3-202ENST00000622555 GIMD1P0DJR0 217 aa17.22■□□□□ 0.35
PTCHD3-202ENST00000622555 PRDX3P30048 256 aaKnown RBP17.22■□□□□ 0.35
PTCHD3-202ENST00000622555 FASLGP48023 281 aa17.22■□□□□ 0.35
PTCHD3-202ENST00000622555 RPL14P50914 215 aaKnown RBP17.22■□□□□ 0.35
PTCHD3-202ENST00000622555 ATXN3P54252 364 aaPredicted RBP17.22■□□□□ 0.35
PTCHD3-202ENST00000622555 PKNOX1P55347 436 aa17.22■□□□□ 0.35
PTCHD3-202ENST00000622555 TRAF3Q13114 568 aa17.22■□□□□ 0.35
PTCHD3-202ENST00000622555 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.22■□□□□ 0.35
PTCHD3-202ENST00000622555 C17orf82Q86X59 251 aaPredicted RBP17.22■□□□□ 0.35
PTCHD3-202ENST00000622555 ARL10Q8N8L6 244 aa17.22■□□□□ 0.35
PTCHD3-202ENST00000622555 SUMF1Q8NBK3 374 aa17.22■□□□□ 0.35
PTCHD3-202ENST00000622555 PIWIL2Q8TC59 973 aaKnown RBP17.22■□□□□ 0.35
PTCHD3-202ENST00000622555 SETD7Q8WTS6 366 aaKnown RBP17.22■□□□□ 0.35
PTCHD3-202ENST00000622555 ACAT2Q9BWD1 397 aa17.22■□□□□ 0.35
PTCHD3-202ENST00000622555 OR6C2Q9NZP2 312 aa17.22■□□□□ 0.35
PTCHD3-202ENST00000622555 TAC3Q9UHF0 121 aa17.22■□□□□ 0.35
PTCHD3-202ENST00000622555 HAO1Q9UJM8 370 aa17.22■□□□□ 0.35
PTCHD3-202ENST00000622555 FIS1Q9Y3D6 152 aa17.22■□□□□ 0.35
PTCHD3-202ENST00000622555 KCNE2Q9Y6J6 123 aa17.22■□□□□ 0.35
PTCHD3-202ENST00000622555 SNRNP200O75643 2136 aaKnown RBP17.22■□□□□ 0.35
PTCHD3-202ENST00000622555 A0A1W2PPV9 198 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 CLGNO14967 610 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 PPM1DO15297 605 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 CRCPO75575 148 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 OR4F21O95013 312 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 ESRRBO95718 433 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 TROVE2P10155 538 aaKnown RBP eCLIP17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 ALPPL2P10696 532 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 NPPBP16860 134 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 SF3A3Q12874 501 aaKnown RBP eCLIP17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 CGB2Q6NT52 195 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 LCTLQ6UWM7 567 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 MILR1Q7Z6M3 343 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 MYLK4Q86YV6 388 aaPredicted RBP17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 MINDY1Q8N5J2 469 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 OR4F6Q8NGB9 312 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 ATOH1Q92858 354 aaPredicted RBP17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 HAUS8Q9BT25 410 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 NTMT1Q9BV86 223 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 DUSP23Q9BVJ7 150 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 PCBD2Q9H0N5 130 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 ACTR8Q9H981 624 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 NPHS2Q9NP85 383 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 GPRC5BQ9NZH0 403 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 ZNF225Q9UK10 706 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 TMEM233B4DJY2 109 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 E7EQ34 232 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 SNX3O60493 162 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 CHRM5P08912 532 aaPredicted RBP17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 PSMB5P28074 263 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 ERVPABLB-1P60509 514 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 LETMD1Q6P1Q0 360 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 SLC35F3Q8IY50 421 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 AFAP1L2Q8N4X5 818 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 CCDC197Q8NCU1 140 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 OR10G6Q8NH81 332 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 NEIL2Q969S2 332 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 GRAMD1AQ96CP6 724 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 KCNA7Q96RP8 456 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 ELAC2Q9BQ52 826 aaKnown RBP17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 TRIM55Q9BYV6 548 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 SH2B3Q9UQQ2 575 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 TRAF6Q9Y4K3 522 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 PCDHB11Q9Y5F2 797 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 VPS13AQ96RL7 3174 aa17.21■□□□□ 0.35
PTCHD3-202ENST00000622555 OR6C74A6NCV1 312 aa17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 RHPN2P1A8MT19 583 aa17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 BTN3A3O00478 584 aa17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 TRIM38O00635 465 aa17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 AZIN1O14977 448 aa17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 TGDSO95455 350 aa17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 CLDN9O95484 217 aa17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 EBLN1P0CF75 366 aa17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 GNAZP19086 355 aa17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 IRF8Q02556 426 aa17.2■□□□□ 0.34
PTCHD3-202ENST00000622555 CHIT1Q13231 466 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms