RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 IGKV1-8A0A0C4DH67 115 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 A0A1W2PNU3 283 aaPredicted RBP13.16□□□□□ -0.3
NEK3-210ENST00000620675 HCRTR1O43613 425 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 PLIN3O60664 434 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 GLRA3O75311 464 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 C9P02748 559 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 ANXA5P08758 320 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 ST6GAL1P15907 406 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 RPA3P35244 121 aaPredicted RBP13.16□□□□□ -0.3
NEK3-210ENST00000620675 MAGOHP61326 146 aaKnown RBP13.16□□□□□ -0.3
NEK3-210ENST00000620675 CDKL1Q00532 357 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 ZIC1Q15915 447 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 TMEM71Q6P5X7 295 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 SPESP1Q6UW49 350 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 OR56A3Q8NH54 315 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 TCP10LQ8TDR4 215 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 CCDC74BQ96LY2 380 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 SH3GL2Q99962 352 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 CUEDC1Q9NWM3 386 aaPredicted RBP13.16□□□□□ -0.3
NEK3-210ENST00000620675 DCDC2Q9UHG0 476 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 APOBEC2Q9Y235 224 aaKnown RBP13.16□□□□□ -0.3
NEK3-210ENST00000620675 SLC22A14Q9Y267 594 aa13.16□□□□□ -0.3
NEK3-210ENST00000620675 FAM221BA6H8Z2 402 aa13.15□□□□□ -0.3
NEK3-210ENST00000620675 G3V2L1 256 aa13.15□□□□□ -0.3
NEK3-210ENST00000620675 DLX3O60479 287 aa13.15□□□□□ -0.3
NEK3-210ENST00000620675 GSTA1P08263 222 aa13.15□□□□□ -0.3
NEK3-210ENST00000620675 RBP1P09455 135 aa13.15□□□□□ -0.3
NEK3-210ENST00000620675 THRAP10827 490 aa13.15□□□□□ -0.3
NEK3-210ENST00000620675 GFAPP14136 432 aa13.15□□□□□ -0.3
NEK3-210ENST00000620675 SLC6A12P48065 614 aa13.15□□□□□ -0.3
NEK3-210ENST00000620675 PUM1Q14671 1186 aaKnown RBP eCLIP13.15□□□□□ -0.3
NEK3-210ENST00000620675 ARHGAP19Q14CB8 494 aa13.15□□□□□ -0.3
NEK3-210ENST00000620675 C16orf72Q14CZ0 275 aa13.15□□□□□ -0.3
NEK3-210ENST00000620675 PHF19Q5T6S3 580 aa13.15□□□□□ -0.3
NEK3-210ENST00000620675 PTGR2Q8N8N7 351 aaPredicted RBP13.15□□□□□ -0.3
NEK3-210ENST00000620675 ARMC2Q8NEN0 867 aa13.15□□□□□ -0.3
NEK3-210ENST00000620675 SMPDL3AQ92484 453 aa13.15□□□□□ -0.3
NEK3-210ENST00000620675 RNF31Q96EP0 1072 aa13.15□□□□□ -0.3
NEK3-210ENST00000620675 TSNARE1Q96NA8 513 aa13.15□□□□□ -0.3
NEK3-210ENST00000620675 FAM111AQ96PZ2 611 aa13.15□□□□□ -0.3
NEK3-210ENST00000620675 SMC6Q96SB8 1091 aa13.15□□□□□ -0.3
NEK3-210ENST00000620675 SGPP1Q9BX95 441 aa13.15□□□□□ -0.3
NEK3-210ENST00000620675 SYNPO2LQ9H987 977 aa13.15□□□□□ -0.3
NEK3-210ENST00000620675 SLC6A20Q9NP91 592 aa13.15□□□□□ -0.3
NEK3-210ENST00000620675 WWOXQ9NZC7 414 aa13.15□□□□□ -0.3
NEK3-210ENST00000620675 NUDT4Q9NZJ9 180 aa13.15□□□□□ -0.3
NEK3-210ENST00000620675 EPHA6Q9UF33 1036 aa13.15□□□□□ -0.3
NEK3-210ENST00000620675 PLLPQ9Y342 182 aa13.15□□□□□ -0.3
NEK3-210ENST00000620675 SCN2AQ99250 2005 aa13.15□□□□□ -0.3
NEK3-210ENST00000620675 CCDC88CQ9P219 2028 aa13.15□□□□□ -0.3
NEK3-210ENST00000620675 SLC9B1P1A6NJY1 282 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 A8MT66 165 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 C2orf74A8MZ97 194 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 HYAL3O43820 417 aaPredicted RBP13.14□□□□□ -0.31
NEK3-210ENST00000620675 KLK8O60259 260 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 RASSF9O75901 435 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 MT-CO3P00414 261 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 NPPBP16860 134 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 EPORP19235 508 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 SPINK2P20155 84 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 MAGP20916 626 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 OAS2P29728 719 aaKnown RBP13.14□□□□□ -0.31
NEK3-210ENST00000620675 ID4P47928 161 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 CCT5P48643 541 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 E2F1Q01094 437 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 ZFP36L1Q07352 338 aaKnown RBP13.14□□□□□ -0.31
NEK3-210ENST00000620675 PRKAA1Q13131 559 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 KCNAB1Q14722 419 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 SF1Q15637 639 aaKnown RBP13.14□□□□□ -0.31
NEK3-210ENST00000620675 RBM44Q6ZP01 1051 aaKnown RBP13.14□□□□□ -0.31
NEK3-210ENST00000620675 PLXDC1Q8IUK5 500 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 OR2L3Q8NG85 312 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 OR4D9Q8NGE8 314 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 PRR11Q96HE9 360 aaPredicted RBP13.14□□□□□ -0.31
NEK3-210ENST00000620675 MECRQ9BV79 373 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 RAB11FIP5Q9BXF6 653 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 PITPNM3Q9BZ71 974 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 RAB33BQ9H082 229 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 EPB41L1Q9H4G0 881 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 MLXIPLQ9NP71 852 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 CCDC177Q9NQR7 707 aaPredicted RBP13.14□□□□□ -0.31
NEK3-210ENST00000620675 MKS1Q9NXB0 559 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 PDP2Q9P2J9 529 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 ENTPD2Q9Y5L3 495 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 IGF2RP11717 2491 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 PRAMEF4O60810 478 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 CSO75390 466 aaKnown RBP13.14□□□□□ -0.31
NEK3-210ENST00000620675 CTSBP07858 339 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 HGFP14210 728 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 SDHBP21912 280 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 GRIA3P42263 894 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 SH3BP2P78314 561 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 KIR2DS3Q14952 304 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 ISXQ2M1V0 245 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 THEMIS2Q5TEJ8 643 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 CACHD1Q5VU97 1274 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 PRAMEF9Q5VWM5 478 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 SULT1C3Q6IMI6 304 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 ARMC6Q6NXE6 501 aa13.14□□□□□ -0.31
NEK3-210ENST00000620675 KLHL35Q6PF15 583 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 386.1 ms