RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 HTR2BP41595 481 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 NSG1P42857 185 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 LEPRP48357 1165 aaKnown RBP10.03□□□□□ -0.8
CUL4A-212ENST00000617546 BMXP51813 675 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 GBX2P52951 348 aaPredicted RBP10.03□□□□□ -0.8
CUL4A-212ENST00000617546 CREMQ03060 361 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 RBBP4Q09028 425 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 SELPLGQ14242 412 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 ZNF234Q14588 700 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 TAF1CQ15572 869 aaPredicted RBP10.03□□□□□ -0.8
CUL4A-212ENST00000617546 SLC36A3Q495N2 470 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 SERPINA13PQ6UXR4 307 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 HSDL2Q6YN16 418 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 TMEM135Q86UB9 458 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 CARM1Q86X55 608 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 RFT1Q96AA3 541 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 L3HYPDHQ96EM0 354 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 CCDC3Q9BQI4 270 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 SLC39A3Q9BRY0 314 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 A0A1B0GVG6 124 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 TMEM233B4DJY2 109 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 C9JVG2 144 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 ATG13O75143 517 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 RFX3P48380 749 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 SHQ1Q6PI26 577 aaKnown RBP10.03□□□□□ -0.8
CUL4A-212ENST00000617546 SLC51AQ86UW1 340 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 C17orf64Q86WR6 236 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 POMGNT2Q8NAT1 580 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 VANGL1Q8TAA9 524 aaPredicted RBP10.03□□□□□ -0.8
CUL4A-212ENST00000617546 LRRC15Q8TF66 581 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 CLEC4DQ8WXI8 215 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 SHISA4Q96DD7 197 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 HSH2DQ96JZ2 352 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 ZSCAN5AQ9BUG6 496 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 CCSER2Q9H7U1 834 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 ERVK-18Q9QC07 812 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 RGS17Q9UGC6 210 aaPredicted RBP10.03□□□□□ -0.8
CUL4A-212ENST00000617546 TBC1D24Q9ULP9 559 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 FZD4Q9ULV1 537 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 DAPL1A0PJW8 107 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 GRID2O43424 1007 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 BCAS1O75363 584 aaPredicted RBP10.03□□□□□ -0.8
CUL4A-212ENST00000617546 H1F0P07305 194 aaKnown RBP10.03□□□□□ -0.8
CUL4A-212ENST00000617546 GGT1P19440 569 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 OPRL1P41146 370 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 RPS5P46782 204 aaKnown RBP10.03□□□□□ -0.8
CUL4A-212ENST00000617546 AP1S2P56377 157 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 MRPS6P82932 125 aaKnown RBP10.03□□□□□ -0.8
CUL4A-212ENST00000617546 NFKB2Q00653 900 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 CHIT1Q13231 466 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 FAM171A1Q5VUB5 890 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 HACD4Q5VWC8 232 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 MSANTD2Q6P1R3 559 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 ZNF613Q6PF04 617 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 SLC36A4Q6YBV0 504 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 LINGO2Q7L985 606 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 NOXA1Q86UR1 476 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 TAC4Q86UU9 113 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 PIWIL1Q96J94 861 aaKnown RBP10.03□□□□□ -0.8
CUL4A-212ENST00000617546 COMMD4Q9H0A8 199 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 DPP7Q9UHL4 492 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 CNTNAP1P78357 1384 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 KDM3BQ7LBC6 1761 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 UBR1Q8IWV7 1749 aa10.03□□□□□ -0.8
CUL4A-212ENST00000617546 A0A1B0GVI7 797 aa10.02□□□□□ -0.8
CUL4A-212ENST00000617546 TSPAN1O60635 241 aa10.02□□□□□ -0.8
CUL4A-212ENST00000617546 AGR2O95994 175 aa10.02□□□□□ -0.8
CUL4A-212ENST00000617546 MT-CYBP00156 380 aaPredicted RBP10.02□□□□□ -0.8
CUL4A-212ENST00000617546 MT-ND2P03891 347 aa10.02□□□□□ -0.8
CUL4A-212ENST00000617546 TFAP2AP05549 437 aa10.02□□□□□ -0.8
CUL4A-212ENST00000617546 CKBP12277 381 aa10.02□□□□□ -0.8
CUL4A-212ENST00000617546 FAM189A2Q15884 450 aa10.02□□□□□ -0.8
CUL4A-212ENST00000617546 PAN2Q504Q3 1202 aaKnown RBP10.02□□□□□ -0.8
CUL4A-212ENST00000617546 RABL3Q5HYI8 236 aa10.02□□□□□ -0.8
CUL4A-212ENST00000617546 NBPF12Q5TAG4 269 aaPredicted RBP10.02□□□□□ -0.8
CUL4A-212ENST00000617546 CLIP4Q8N3C7 705 aa10.02□□□□□ -0.8
CUL4A-212ENST00000617546 SIDT2Q8NBJ9 832 aaKnown RBP10.02□□□□□ -0.8
CUL4A-212ENST00000617546 BPIFB1Q8TDL5 484 aa10.02□□□□□ -0.8
CUL4A-212ENST00000617546 MAELQ96JY0 434 aaKnown RBP10.02□□□□□ -0.8
CUL4A-212ENST00000617546 SLC32A1Q9H598 525 aa10.02□□□□□ -0.8
CUL4A-212ENST00000617546 SRRDQ9UH36 339 aa10.02□□□□□ -0.8
CUL4A-212ENST00000617546 MAU2Q9Y6X3 613 aa10.02□□□□□ -0.8
CUL4A-212ENST00000617546 NEMP2A6NFY4 417 aa10.02□□□□□ -0.81
CUL4A-212ENST00000617546 FAM25EA8MYX2 175 aa10.02□□□□□ -0.81
CUL4A-212ENST00000617546 LRRN3E7EW58 273 aa10.02□□□□□ -0.81
CUL4A-212ENST00000617546 ADAMTS3O15072 1205 aa10.02□□□□□ -0.81
CUL4A-212ENST00000617546 PRKACBP22694 351 aa10.02□□□□□ -0.81
CUL4A-212ENST00000617546 PLA2G16P53816 162 aa10.02□□□□□ -0.81
CUL4A-212ENST00000617546 CRISP3P54108 245 aa10.02□□□□□ -0.81
CUL4A-212ENST00000617546 TARDBPQ13148 414 aaKnown RBP eCLIP10.02□□□□□ -0.813e-7■■■■□ 24.7
CUL4A-212ENST00000617546 RPA4Q13156 261 aa10.02□□□□□ -0.81
CUL4A-212ENST00000617546 ANKDD1AQ495B1 522 aa10.02□□□□□ -0.81
CUL4A-212ENST00000617546 DPY19L3Q6ZPD9 716 aa10.02□□□□□ -0.81
CUL4A-212ENST00000617546 TRAPPC5Q8IUR0 188 aa10.02□□□□□ -0.81
CUL4A-212ENST00000617546 TXNDC5Q8NBS9 432 aaKnown RBP10.02□□□□□ -0.81
CUL4A-212ENST00000617546 PAPD5Q8NDF8 572 aaKnown RBP10.02□□□□□ -0.81
CUL4A-212ENST00000617546 ADAMTS15Q8TE58 950 aa10.02□□□□□ -0.81
CUL4A-212ENST00000617546 SLC35F5Q8WV83 523 aa10.02□□□□□ -0.81
CUL4A-212ENST00000617546 YIPF2Q9BWQ6 316 aa10.02□□□□□ -0.81
CUL4A-212ENST00000617546 TRIM2Q9C040 744 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms