RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 INIPQ9NRY2 104 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 GPR83Q9NYM4 423 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 IMPACTQ9P2X3 320 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 SAE1Q9UBE0 346 aaPredicted RBP8.3□□□□□ -1.08
GPC6-202ENST00000617456 CRNNQ9UBG3 495 aaPredicted RBP8.3□□□□□ -1.08
GPC6-202ENST00000617456 PCDHGB7Q9Y5F8 929 aa8.3□□□□□ -1.08
GPC6-202ENST00000617456 FBN2P35556 2912 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 ARPC4-TTLL3A0A0A6YYG9 625 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 UBA6A0AVT1 1052 aaPredicted RBP8.29□□□□□ -1.08
GPC6-202ENST00000617456 MGAT4DA6NG13 374 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 H7C0S8 307 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 CASQ2O14958 399 aaPredicted RBP8.29□□□□□ -1.08
GPC6-202ENST00000617456 AURKAO14965 403 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 STX7O15400 261 aaKnown RBP8.29□□□□□ -1.08
GPC6-202ENST00000617456 PSMD3O43242 534 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 CBX6O95503 412 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 KLK3P07288 261 aaPredicted RBP8.29□□□□□ -1.08
GPC6-202ENST00000617456 PIRTP0C851 137 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 RALBP11234 206 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 NDUFS1P28331 727 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 ZNF75DP51815 510 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 VAV2P52735 878 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 BCL7AQ4VC05 210 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 ZRANB3Q5FWF4 1079 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 ANKRD20A2Q5SQ80 823 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 ZNF362Q5T0B9 420 aaPredicted RBP8.29□□□□□ -1.08
GPC6-202ENST00000617456 FAM182AQ5T1J6 154 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 ANKRD20A1Q5TYW2 823 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 ANKRD20A3Q5VUR7 823 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 ALKBH2Q6NS38 261 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 TRAPPC5Q8IUR0 188 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 IQCKQ8N0W5 287 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 UBL4BQ8N7F7 174 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 LRRC57Q8N9N7 239 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 GPR150Q8NGU9 434 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 OR8K5Q8NH50 307 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 ACTL9Q8TC94 416 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 ZNF398Q8TD17 642 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 MARVELD3Q96A59 401 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 ULK4Q96C45 1275 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 MOCOSQ96EN8 888 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 MED30Q96HR3 178 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 SPATA13Q96N96 652 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 RANBP9Q96S59 729 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 PRPF18Q99633 342 aaKnown RBP8.29□□□□□ -1.08
GPC6-202ENST00000617456 CCM2Q9BSQ5 444 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 FRMD8P1Q9BZ68 369 aaPredicted RBP8.29□□□□□ -1.08
GPC6-202ENST00000617456 SOHLH2Q9NX45 425 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 PPP1R14DQ9NXH3 145 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 TMPRSS11EQ9UL52 423 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 HYOU1Q9Y4L1 999 aa8.29□□□□□ -1.08
GPC6-202ENST00000617456 MDC1Q14676 2089 aaKnown RBP8.29□□□□□ -1.08
GPC6-202ENST00000617456 CNTRLQ7Z7A1 2325 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 SVILO95425 2214 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 ERI2A8K979 691 aaKnown RBP8.28□□□□□ -1.08
GPC6-202ENST00000617456 CFAP99D6REC4 459 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 ANKRD65E5RJM6 399 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 H7C0C1 242 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 MATN2O00339 956 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 QSOX1O00391 747 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 PFDN1O60925 122 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 POP7O75817 140 aaKnown RBP8.28□□□□□ -1.08
GPC6-202ENST00000617456 SRP72O76094 671 aaKnown RBP8.28□□□□□ -1.08
GPC6-202ENST00000617456 PAHP00439 452 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 PRF1P14222 555 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 RPS2P15880 293 aaKnown RBP8.28□□□□□ -1.08
GPC6-202ENST00000617456 KRT4P19013 534 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 MSH3P20585 1137 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 RBL1P28749 1068 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 PRKAR1BP31321 381 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 OTX2P32243 289 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 HSD17B2P37059 387 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 ATP5OP48047 213 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 ARCN1P48444 511 aaKnown RBP8.28□□□□□ -1.08
GPC6-202ENST00000617456 RIPPLY3P57055 190 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 BPIFB3P59826 476 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 EIF3EP60228 445 aaKnown RBP8.28□□□□□ -1.08
GPC6-202ENST00000617456 DSTNP60981 165 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 HSD11B2P80365 405 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 OTUD4Q01804 1114 aaKnown RBP8.28□□□□□ -1.08
GPC6-202ENST00000617456 KLC1Q07866 573 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 RPA4Q13156 261 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 ATP1A4Q13733 1029 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 TUBB2AQ13885 445 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 PLCL1Q15111 1095 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 PARP6Q2NL67 630 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 KRT71Q3SY84 523 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 KHDC1Q4VXA5 237 aaKnown RBP8.28□□□□□ -1.08
GPC6-202ENST00000617456 FAM209AQ5JX71 171 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 PLEKHS1Q5SXH7 462 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 GPRC6AQ5T6X5 926 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 VWA5B1Q5TIE3 1220 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 IZUMO3Q5VZ72 239 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 TUBA3EQ6PEY2 450 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 CAND1Q86VP6 1230 aaKnown RBP8.28□□□□□ -1.08
GPC6-202ENST00000617456 SNX32Q86XE0 403 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 HPS6Q86YV9 775 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 ZBTB2Q8N680 514 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 TMCO5AQ8N6Q1 288 aa8.28□□□□□ -1.08
GPC6-202ENST00000617456 RASGEF1AQ8N9B8 481 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms