RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 WDR77Q9BQA1 342 aaPredicted RBP19.89■□□□□ 0.77
TRAPPC3-208ENST00000616074 TTC7AQ9ULT0 858 aaPredicted RBP19.89■□□□□ 0.77
TRAPPC3-208ENST00000616074 ITPR2Q14571 2701 aa19.89■□□□□ 0.77
TRAPPC3-208ENST00000616074 FITM1A5D6W6 292 aa19.88■□□□□ 0.77
TRAPPC3-208ENST00000616074 TARM1B6A8C7 271 aa19.88■□□□□ 0.77
TRAPPC3-208ENST00000616074 NRP2O60462 931 aa19.88■□□□□ 0.77
TRAPPC3-208ENST00000616074 FKBP9O95302 570 aa19.88■□□□□ 0.77
TRAPPC3-208ENST00000616074 CLDN1O95832 211 aa19.88■□□□□ 0.77
TRAPPC3-208ENST00000616074 RPS3P23396 243 aaKnown RBP eCLIP19.88■□□□□ 0.77
TRAPPC3-208ENST00000616074 VSX2P58304 361 aaPredicted RBP19.88■□□□□ 0.77
TRAPPC3-208ENST00000616074 SIX1Q15475 284 aaPredicted RBP19.88■□□□□ 0.77
TRAPPC3-208ENST00000616074 HIF1AQ16665 826 aa19.88■□□□□ 0.77
TRAPPC3-208ENST00000616074 FRMPD2BQ6IN97 320 aa19.88■□□□□ 0.77
TRAPPC3-208ENST00000616074 TTC23LQ6PF05 361 aa19.88■□□□□ 0.77
TRAPPC3-208ENST00000616074 GSDMBQ8TAX9 411 aa19.88■□□□□ 0.77
TRAPPC3-208ENST00000616074 SKA2Q8WVK7 121 aaPredicted RBP19.88■□□□□ 0.77
TRAPPC3-208ENST00000616074 ZUFSPQ96AP4 578 aa19.88■□□□□ 0.77
TRAPPC3-208ENST00000616074 MIPEPQ99797 713 aa19.88■□□□□ 0.77
TRAPPC3-208ENST00000616074 MRM3Q9HC36 420 aaKnown RBP19.88■□□□□ 0.77
TRAPPC3-208ENST00000616074 EIF2B3Q9NR50 452 aaKnown RBP19.88■□□□□ 0.77
TRAPPC3-208ENST00000616074 MAU2Q9Y6X3 613 aa19.88■□□□□ 0.77
TRAPPC3-208ENST00000616074 CELSR2Q9HCU4 2923 aa19.87■□□□□ 0.77
TRAPPC3-208ENST00000616074 NDUFS3O75489 264 aa19.87■□□□□ 0.77
TRAPPC3-208ENST00000616074 MED26O95402 600 aa19.87■□□□□ 0.77
TRAPPC3-208ENST00000616074 COL8A1P27658 744 aa19.87■□□□□ 0.77
TRAPPC3-208ENST00000616074 NMBRP28336 390 aa19.87■□□□□ 0.77
TRAPPC3-208ENST00000616074 CTSL3PQ5NE16 218 aa19.87■□□□□ 0.77
TRAPPC3-208ENST00000616074 WASHC2DQ5SRD0 308 aa19.87■□□□□ 0.77
TRAPPC3-208ENST00000616074 CNSTQ6PJW8 725 aa19.87■□□□□ 0.77
TRAPPC3-208ENST00000616074 IGFL2Q6UWQ7 119 aa19.87■□□□□ 0.77
TRAPPC3-208ENST00000616074 OTOAQ7RTW8 1153 aa19.87■□□□□ 0.77
TRAPPC3-208ENST00000616074 MPP5Q8N3R9 675 aa19.87■□□□□ 0.77
TRAPPC3-208ENST00000616074 OR2L3Q8NG85 312 aa19.87■□□□□ 0.77
TRAPPC3-208ENST00000616074 PPP4R1Q8TF05 950 aa19.87■□□□□ 0.77
TRAPPC3-208ENST00000616074 UBE2Q2Q8WVN8 375 aa19.87■□□□□ 0.77
TRAPPC3-208ENST00000616074 NXT1Q9UKK6 140 aaKnown RBP19.87■□□□□ 0.77
TRAPPC3-208ENST00000616074 GUCA1BQ9UMX6 200 aa19.87■□□□□ 0.77
TRAPPC3-208ENST00000616074 NOVA2Q9UNW9 492 aaKnown RBP19.87■□□□□ 0.77
TRAPPC3-208ENST00000616074 SLC5A6Q9Y289 635 aa19.87■□□□□ 0.77
TRAPPC3-208ENST00000616074 A0A0J9YVX5 310 aa19.86■□□□□ 0.77
TRAPPC3-208ENST00000616074 A0A1W2PPV9 198 aa19.86■□□□□ 0.77
TRAPPC3-208ENST00000616074 VSTM2BA6NLU5 285 aa19.86■□□□□ 0.77
TRAPPC3-208ENST00000616074 EIF3BP55884 814 aaKnown RBP19.86■□□□□ 0.77
TRAPPC3-208ENST00000616074 BASP1P80723 227 aaKnown RBP19.86■□□□□ 0.77
TRAPPC3-208ENST00000616074 ELOAQ14241 798 aaKnown RBP19.86■□□□□ 0.77
TRAPPC3-208ENST00000616074 RBBP7Q16576 425 aa19.86■□□□□ 0.77
TRAPPC3-208ENST00000616074 FAM214AQ32MH5 1076 aa19.86■□□□□ 0.77
TRAPPC3-208ENST00000616074 TUBB8Q3ZCM7 444 aa19.86■□□□□ 0.77
TRAPPC3-208ENST00000616074 AGAP7PQ5VUJ5 663 aa19.86■□□□□ 0.77
TRAPPC3-208ENST00000616074 MAMDC2Q7Z304 686 aaPredicted RBP19.86■□□□□ 0.77
TRAPPC3-208ENST00000616074 LRRC6Q86X45 466 aa19.86■□□□□ 0.77
TRAPPC3-208ENST00000616074 GAS2L3Q86XJ1 694 aa19.86■□□□□ 0.77
TRAPPC3-208ENST00000616074 PARP9Q8IXQ6 854 aa19.86■□□□□ 0.77
TRAPPC3-208ENST00000616074 RAB42Q8N4Z0 105 aa19.86■□□□□ 0.77
TRAPPC3-208ENST00000616074 SPC24Q8NBT2 197 aa19.86■□□□□ 0.77
TRAPPC3-208ENST00000616074 HMGCLL1Q8TB92 370 aa19.86■□□□□ 0.77
TRAPPC3-208ENST00000616074 C5orf34Q96MH7 638 aa19.86■□□□□ 0.77
TRAPPC3-208ENST00000616074 AGAP4Q96P64 663 aa19.86■□□□□ 0.77
TRAPPC3-208ENST00000616074 MESP1Q9BRJ9 268 aa19.86■□□□□ 0.77
TRAPPC3-208ENST00000616074 IL22Q9GZX6 179 aa19.86■□□□□ 0.77
TRAPPC3-208ENST00000616074 SEMA3GQ9NS98 782 aa19.86■□□□□ 0.77
TRAPPC3-208ENST00000616074 TSR3Q9UJK0 312 aaKnown RBP19.86■□□□□ 0.77
TRAPPC3-208ENST00000616074 KLK4Q9Y5K2 254 aa19.86■□□□□ 0.77
TRAPPC3-208ENST00000616074 MRFAP1Q9Y605 127 aa19.86■□□□□ 0.77
TRAPPC3-208ENST00000616074 FAM169AQ9Y6X4 670 aa19.86■□□□□ 0.77
TRAPPC3-208ENST00000616074 LOC105369274A0A096LPK9 316 aa19.85■□□□□ 0.77
TRAPPC3-208ENST00000616074 LOC102723532A0A0G2JNH3 316 aa19.85■□□□□ 0.77
TRAPPC3-208ENST00000616074 HYKKA2RU49 373 aa19.85■□□□□ 0.77
TRAPPC3-208ENST00000616074 KPNA5O15131 536 aa19.85■□□□□ 0.77
TRAPPC3-208ENST00000616074 SRPX2O60687 465 aaPredicted RBP19.85■□□□□ 0.77
TRAPPC3-208ENST00000616074 ARNTP27540 789 aa19.85■□□□□ 0.77
TRAPPC3-208ENST00000616074 YBX1P67809 324 aaKnown RBP19.85■□□□□ 0.77
TRAPPC3-208ENST00000616074 FASTKQ14296 549 aaKnown RBP19.85■□□□□ 0.77
TRAPPC3-208ENST00000616074 CCNG2Q16589 344 aa19.85■□□□□ 0.77
TRAPPC3-208ENST00000616074 ZNF787Q6DD87 383 aa19.85■□□□□ 0.77
TRAPPC3-208ENST00000616074 RNF44Q7L0R7 432 aa19.85■□□□□ 0.77
TRAPPC3-208ENST00000616074 OR4N4Q8N0Y3 316 aa19.85■□□□□ 0.77
TRAPPC3-208ENST00000616074 OTUD6BQ8N6M0 293 aa19.85■□□□□ 0.77
TRAPPC3-208ENST00000616074 OR11G2Q8NGC1 345 aa19.85■□□□□ 0.77
TRAPPC3-208ENST00000616074 OR2A1Q8NGT9 310 aa19.85■□□□□ 0.77
TRAPPC3-208ENST00000616074 FOPNLQ96NB1 174 aa19.85■□□□□ 0.77
TRAPPC3-208ENST00000616074 BIRC8Q96P09 236 aa19.85■□□□□ 0.77
TRAPPC3-208ENST00000616074 TSGA10Q9BZW7 698 aa19.85■□□□□ 0.77
TRAPPC3-208ENST00000616074 LHPPQ9H008 270 aa19.85■□□□□ 0.77
TRAPPC3-208ENST00000616074 IL1RAPL1Q9NZN1 696 aa19.85■□□□□ 0.77
TRAPPC3-208ENST00000616074 ZC3H7BQ9UGR2 993 aaKnown RBP19.85■□□□□ 0.77
TRAPPC3-208ENST00000616074 CACNA1DQ01668 2161 aa19.85■□□□□ 0.77
TRAPPC3-208ENST00000616074 CNTRLQ7Z7A1 2325 aa19.84■□□□□ 0.77
TRAPPC3-208ENST00000616074 CCNFP41002 786 aa19.84■□□□□ 0.77
TRAPPC3-208ENST00000616074 NPY2RP49146 381 aa19.84■□□□□ 0.77
TRAPPC3-208ENST00000616074 KLC1Q07866 573 aa19.84■□□□□ 0.77
TRAPPC3-208ENST00000616074 Q0VFX4 171 aa19.84■□□□□ 0.77
TRAPPC3-208ENST00000616074 MEI1Q5TIA1 1274 aa19.84■□□□□ 0.77
TRAPPC3-208ENST00000616074 IRAK1BP1Q5VVH5 260 aa19.84■□□□□ 0.77
TRAPPC3-208ENST00000616074 CES3Q6UWW8 571 aa19.84■□□□□ 0.77
TRAPPC3-208ENST00000616074 ST6GALNAC3Q8NDV1 305 aa19.84■□□□□ 0.77
TRAPPC3-208ENST00000616074 DNAJB14Q8TBM8 379 aa19.84■□□□□ 0.77
TRAPPC3-208ENST00000616074 MFSD3Q96ES6 412 aa19.84■□□□□ 0.77
TRAPPC3-208ENST00000616074 THOC3Q96J01 351 aaKnown RBP19.84■□□□□ 0.77
TRAPPC3-208ENST00000616074 CRB3Q9BUF7 120 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms