RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 RTL4Q6ZR62 310 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 KCTD9Q7L273 389 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 PIWIL2Q8TC59 973 aaKnown RBP9.09□□□□□ -0.95
COL12A1-211ENST00000615798 ZNF486Q96H40 463 aaPredicted RBP9.09□□□□□ -0.95
COL12A1-211ENST00000615798 ACTRT3Q9BYD9 372 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 MYOZ2Q9NPC6 264 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 IKZF2Q9UKS7 526 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 SLC28A1O00337 649 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 KCNQ2O43526 872 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 RPA3P35244 121 aaPredicted RBP9.09□□□□□ -0.95
COL12A1-211ENST00000615798 CPT1AP50416 773 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 TMEM214Q6NUQ4 689 aaKnown RBP9.09□□□□□ -0.95
COL12A1-211ENST00000615798 IRF2BP2Q7Z5L9 587 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 HAS2Q92819 552 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 DNAJC28Q9NX36 388 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 SNAPC2Q13487 334 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 ARFRP1Q13795 201 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 SF1Q15637 639 aaKnown RBP9.09□□□□□ -0.95
COL12A1-211ENST00000615798 ANXA8L1Q5VT79 327 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 PIGXQ8TBF5 258 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 MFSD3Q96ES6 412 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 S100A16Q96FQ6 103 aaKnown RBP9.09□□□□□ -0.95
COL12A1-211ENST00000615798 TTYH2Q9BSA4 534 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 WACQ9BTA9 647 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 LGALS13Q9UHV8 139 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 SIGLEC16A6NMB1 481 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 PPP1R2P9O14990 202 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 METTL15P1P0C7V9 234 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 BAMBIQ13145 260 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 AUHQ13825 339 aaKnown RBP9.09□□□□□ -0.95
COL12A1-211ENST00000615798 RAB41Q5JT25 222 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 ZNF561Q8N587 486 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 FCAMRQ8WWV6 532 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 MYLIPQ8WY64 445 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 BSCL2Q96G97 398 aaPredicted RBP9.09□□□□□ -0.95
COL12A1-211ENST00000615798 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.09□□□□□ -0.95
COL12A1-211ENST00000615798 NXF3Q9H4D5 531 aaKnown RBP9.09□□□□□ -0.95
COL12A1-211ENST00000615798 IPPKQ9H8X2 491 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 NIT2Q9NQR4 276 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 LSM7Q9UK45 103 aaKnown RBP9.09□□□□□ -0.95
COL12A1-211ENST00000615798 CDH10Q9Y6N8 788 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 NUDT19A8MXV4 375 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 INMT-MINDY4F8WBC2 141 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 DLGAP1O14490 977 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 EI24O14681 340 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 ZNF311Q5JNZ3 666 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 PSTKQ8IV42 348 aaKnown RBP9.09□□□□□ -0.95
COL12A1-211ENST00000615798 ADGRG2Q8IZP9 1017 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 AKR7LQ8NHP1 331 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 CPT1CQ8TCG5 803 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 PPM1MQ96MI6 270 aa9.09□□□□□ -0.95
COL12A1-211ENST00000615798 NUFIP1Q9UHK0 495 aaKnown RBP9.09□□□□□ -0.95
COL12A1-211ENST00000615798 TRAFD1O14545 582 aaPredicted RBP9.09□□□□□ -0.96
COL12A1-211ENST00000615798 TP73O15350 636 aa9.09□□□□□ -0.96
COL12A1-211ENST00000615798 SMTNL2Q2TAL5 461 aa9.09□□□□□ -0.96
COL12A1-211ENST00000615798 LRRC66Q68CR7 880 aa9.09□□□□□ -0.96
COL12A1-211ENST00000615798 KLHL36Q8N4N3 616 aa9.09□□□□□ -0.96
COL12A1-211ENST00000615798 MR1Q95460 341 aa9.09□□□□□ -0.96
COL12A1-211ENST00000615798 TARS2Q9BW92 718 aaKnown RBP9.09□□□□□ -0.96
COL12A1-211ENST00000615798 FAIM2Q9BWQ8 316 aa9.09□□□□□ -0.96
COL12A1-211ENST00000615798 IRS2Q9Y4H2 1338 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 EIF1AYO14602 144 aaKnown RBP9.08□□□□□ -0.96
COL12A1-211ENST00000615798 ICMTO60725 284 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 IL3P08700 152 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 EIF1AXP47813 144 aaKnown RBP9.08□□□□□ -0.96
COL12A1-211ENST00000615798 CDH8P55286 799 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 IFNLR1Q8IU57 520 aaPredicted RBP9.08□□□□□ -0.96
COL12A1-211ENST00000615798 PCED1AQ9H1Q7 454 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 EBF3Q9H4W6 596 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 ZDHHC11Q9H8X9 412 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 ENAMQ9NRM1 1142 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 TM7SF2O76062 418 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 EPORP19235 508 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 DSC3Q14574 896 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 HSDL2Q6YN16 418 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 USP45Q70EL2 814 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 CLIP4Q8N3C7 705 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 OR10T2Q8NGX3 314 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 OPA3Q9H6K4 179 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 UXTQ9UBK9 157 aaPredicted RBP9.08□□□□□ -0.96
COL12A1-211ENST00000615798 IFT52Q9Y366 437 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 J3QRK9 145 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 ADAM12O43184 909 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 IRF2BP1Q8IU81 584 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 FBXL8Q96CD0 374 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 CD300AQ9UGN4 299 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 YARS2Q9Y2Z4 477 aaKnown RBP9.08□□□□□ -0.96
COL12A1-211ENST00000615798 ITGA4P13612 1032 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 NIPAL4Q0D2K0 466 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 SNTA1Q13424 505 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 BBS12Q6ZW61 710 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 CBR4Q8N4T8 237 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 PLPP5Q8NEB5 264 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 MTMR12Q9C0I1 747 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 SH2B3Q9UQQ2 575 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 PCDHGA9Q9Y5G4 932 aaKnown RBP9.08□□□□□ -0.96
COL12A1-211ENST00000615798 NUP188Q5SRE5 1749 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 CLIC1O00299 241 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 ALOX15BO15296 676 aa9.08□□□□□ -0.96
COL12A1-211ENST00000615798 HTR7P34969 479 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms