RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 ATXN7L2Q5T6C5 722 aaPredicted RBP12.76□□□□□ -0.37
FOXN3-219ENST00000615335 NUDT18Q6ZVK8 323 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 SNX29P2Q8IUI4 249 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 SFTPA1Q8IWL2 248 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 RYBPQ8N488 228 aaPredicted RBP12.76□□□□□ -0.37
FOXN3-219ENST00000615335 METTL2AQ96IZ6 378 aaKnown RBP12.76□□□□□ -0.37
FOXN3-219ENST00000615335 DACH2Q96NX9 599 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 MEAF6Q9HAF1 191 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 HEBP1Q9NRV9 189 aa12.76□□□□□ -0.37
FOXN3-219ENST00000615335 KIAA1549LQ6ZVL6 1849 aa12.75□□□□□ -0.37
FOXN3-219ENST00000615335 HEATR9A2RTY3 570 aa12.75□□□□□ -0.37
FOXN3-219ENST00000615335 E7ENX8 843 aa12.75□□□□□ -0.37
FOXN3-219ENST00000615335 PDPK1O15530 556 aa12.75□□□□□ -0.37
FOXN3-219ENST00000615335 KCNK2O95069 426 aa12.75□□□□□ -0.37
FOXN3-219ENST00000615335 RBP1P09455 135 aa12.75□□□□□ -0.37
FOXN3-219ENST00000615335 EEF1B2P24534 225 aaKnown RBP12.75□□□□□ -0.37
FOXN3-219ENST00000615335 CLCN5P51795 746 aa12.75□□□□□ -0.37
FOXN3-219ENST00000615335 PLA2G16P53816 162 aa12.75□□□□□ -0.37
FOXN3-219ENST00000615335 WNT3AP56704 352 aa12.75□□□□□ -0.37
FOXN3-219ENST00000615335 ST8SIA6P61647 398 aa12.75□□□□□ -0.37
FOXN3-219ENST00000615335 BNIP2Q12982 314 aa12.75□□□□□ -0.37
FOXN3-219ENST00000615335 AGKQ53H12 422 aa12.75□□□□□ -0.37
FOXN3-219ENST00000615335 REP15Q6BDI9 236 aa12.75□□□□□ -0.37
FOXN3-219ENST00000615335 ALG1LQ6GMV1 187 aa12.75□□□□□ -0.37
FOXN3-219ENST00000615335 CUZD1Q86UP6 607 aa12.75□□□□□ -0.37
FOXN3-219ENST00000615335 HORMAD1Q86X24 394 aa12.75□□□□□ -0.37
FOXN3-219ENST00000615335 OR6K2Q8NGY2 324 aa12.75□□□□□ -0.37
FOXN3-219ENST00000615335 FKBP10Q96AY3 582 aa12.75□□□□□ -0.37
FOXN3-219ENST00000615335 TSPAN17Q96FV3 270 aa12.75□□□□□ -0.37
FOXN3-219ENST00000615335 FBRSL1Q9HCM7 1045 aaKnown RBP12.75□□□□□ -0.37
FOXN3-219ENST00000615335 POLE4Q9NR33 117 aa12.75□□□□□ -0.37
FOXN3-219ENST00000615335 TRIOO75962 3097 aa12.75□□□□□ -0.37
FOXN3-219ENST00000615335 C16orf96A6NNT2 1141 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 ERVH48-1M5A8F1 160 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 NARSO43776 548 aaKnown RBP12.74□□□□□ -0.37
FOXN3-219ENST00000615335 KCNJ13O60928 360 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 NDST3O95803 873 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 APODP05090 189 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 CR2P20023 1033 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 AQP6Q13520 282 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 IHHQ14623 411 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 EIF4HQ15056 248 aaKnown RBP12.74□□□□□ -0.37
FOXN3-219ENST00000615335 CARTPTQ16568 116 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 PTPRNQ16849 979 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 ZNF789Q5FWF6 425 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 PAGE2BQ5JRK9 111 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 ATAD3CQ5T2N8 411 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 FAM205BPQ63HN1 556 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 XAF1Q6GPH4 301 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 C22orf39Q6P5X5 142 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 PIWIL3Q7Z3Z3 882 aaKnown RBP12.74□□□□□ -0.37
FOXN3-219ENST00000615335 LYSMD2Q8IV50 215 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 CCDC103Q8IW40 242 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.74□□□□□ -0.37
FOXN3-219ENST00000615335 OR6F1Q8NGZ6 308 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 RHOXF1Q8NHV9 184 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 HMGCLL1Q8TB92 370 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 MRGPRX3Q96LB0 322 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 CEP19Q96LK0 163 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 P2RY13Q9BPV8 354 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 ACAT2Q9BWD1 397 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 FUNDC2Q9BWH2 189 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 RPRD1BQ9NQG5 326 aaKnown RBP12.74□□□□□ -0.37
FOXN3-219ENST00000615335 CACNA2D2Q9NY47 1150 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 WARS2Q9UGM6 360 aaKnown RBP12.74□□□□□ -0.37
FOXN3-219ENST00000615335 POLHQ9Y253 713 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 CFL2Q9Y281 166 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 PIAS3Q9Y6X2 628 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 ANKRD36A6QL64 1941 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 RNF103-CHMP3A0A140T963 221 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 A0A1W2PQ72 361 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 ZNF821O75541 412 aaPredicted RBP12.74□□□□□ -0.37
FOXN3-219ENST00000615335 RASAL1O95294 804 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 IGSF6O95976 241 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 SRPRAP08240 638 aaKnown RBP12.74□□□□□ -0.37
FOXN3-219ENST00000615335 SNRPD1P62314 119 aaKnown RBP12.74□□□□□ -0.37
FOXN3-219ENST00000615335 RACK1P63244 317 aaKnown RBP12.74□□□□□ -0.37
FOXN3-219ENST00000615335 ATP6AP1Q15904 470 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 RPS27LQ71UM5 84 aaKnown RBP12.74□□□□□ -0.37
FOXN3-219ENST00000615335 ADCK1Q86TW2 530 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 SLC22A9Q8IVM8 553 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 POC5Q8NA72 575 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 OR2AP1Q8NGE2 309 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 LPGAT1Q92604 370 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 ISG20Q96AZ6 181 aaKnown RBP12.74□□□□□ -0.37
FOXN3-219ENST00000615335 PCDHAC1Q9H158 963 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 TNFRSF12AQ9NP84 129 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 CCDC167Q9P0B6 97 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 TNFRSF10DQ9UBN6 386 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 SARDHQ9UL12 918 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 ATG2BQ96BY7 2078 aa12.74□□□□□ -0.37
FOXN3-219ENST00000615335 FAM25EA8MYX2 175 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 LOC730098B7Z3J9 87 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 M0R3G1 203 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 SYNCRIPO60506 623 aaKnown RBP12.73□□□□□ -0.37
FOXN3-219ENST00000615335 SNRPB2P08579 225 aaKnown RBP12.73□□□□□ -0.37
FOXN3-219ENST00000615335 CTHP32929 405 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 POLR2IP36954 125 aaKnown RBP12.73□□□□□ -0.37
FOXN3-219ENST00000615335 TDGQ13569 410 aa12.73□□□□□ -0.37
FOXN3-219ENST00000615335 ACAP2Q15057 778 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms