RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 LRATO95237 230 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 HOXD8P13378 290 aaPredicted RBP9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 ZNF823P16415 610 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 ENPP2Q13822 863 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 QPCTQ16769 361 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 DUOXA1Q1HG43 343 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 MANEALQ5VSG8 457 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 STK32CQ86UX6 486 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 KIAA1958Q8N8K9 716 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 FGF13Q92913 245 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 C1orf50Q9BV19 199 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 DUSP26Q9BV47 211 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 IKZF4Q9H2S9 585 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 CAB39LQ9H9S4 337 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 ATXN10Q9UBB4 475 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 TMEM98Q9Y2Y6 226 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 WASH4PA8MWX3 477 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 CDC7O00311 574 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 C6P13671 934 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 STC1P52823 247 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 MGAT3Q09327 533 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 C14orf80Q86SX3 495 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 C19orf18Q8NEA5 215 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 ST13P5Q8NFI4 369 aaPredicted RBP9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 ALG3Q92685 438 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 BMFQ96LC9 184 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 NAA11Q9BSU3 229 aaPredicted RBP9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 XYLT2Q9H1B5 865 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 EVA1AQ9H8M9 152 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 A0A1B0GTW7 788 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 PDHA1P08559 390 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 FAM58BPP0C7Q3 252 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 NR2F6P10588 404 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 GP1BBP13224 206 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 BDKRB1P46663 353 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 CLCN4P51793 760 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 MTTPP55157 894 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 FAM91A1Q658Y4 838 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 FSTL4Q6MZW2 842 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 ZNF765Q7L2R6 523 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 AMIGO1Q86WK6 493 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 HIPK1Q86Z02 1210 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 ZNF440Q8IYI8 595 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 CBARPQ8N350 705 aaPredicted RBP9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 SLC35B2Q8TB61 432 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 IMP4Q96G21 291 aaKnown RBP9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 REM1O75628 298 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 GALK1P51570 392 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 RRADP55042 308 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 DSC1Q08554 894 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 BST1Q10588 318 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 XAGE5Q8WWM1 108 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 GPATCH1Q9BRR8 931 aaKnown RBP9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 ZNF229Q9UJW7 825 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 PCDHGB1Q9Y5G3 927 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 LAMB2P55268 1798 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 PNMA8CA0A1B0GUJ8 204 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 A0A1W2PRB8 838 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 HYKKA2RU49 373 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 ALDOAP04075 364 aaKnown RBP9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 FESP07332 822 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 FAM189A2Q15884 450 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 TMEM240Q5SV17 173 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 DCST1Q5T197 706 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 OR13C4Q8NGS5 318 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 EEF1AKMT1Q8WVE0 214 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 ZNF689Q96CS4 500 aaPredicted RBP9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 ZFRQ96KR1 1074 aaKnown RBP9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 CDC6Q99741 560 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 SGIP1Q9BQI5 828 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 E7EQ34 232 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 SRP54P61011 504 aaKnown RBP9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 SLC9B1Q4ZJI4 515 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 IL23RQ5VWK5 629 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 GTF2IRD2BQ6EKJ0 949 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 GTF2IRD2Q86UP8 949 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 TMEM79Q9BSE2 394 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 CFHR5Q9BXR6 569 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 LRP5O75197 1615 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 MYH8P13535 1937 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 NRP2O60462 931 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 ARHGEF15O94989 841 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 HNRNPLP14866 589 aaKnown RBP eCLIP9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 ACADLP28330 430 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 VIPR2P41587 438 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 HSPB3Q12988 150 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 HNRNPA1L2Q32P51 320 aaKnown RBP9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 NDUFAF6Q330K2 333 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 FRG2Q64ET8 278 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 PIM3Q86V86 326 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 SVOPLQ8N434 492 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 KDM1BQ8NB78 822 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 RORBQ92753 470 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 FRG2BQ96QU4 278 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 KLHL1Q9NR64 748 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 EIF2B4Q9UI10 523 aaKnown RBP9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 ERGIC3Q9Y282 383 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 H3BQ06 376 aaPredicted RBP9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 CST1P01037 141 aa9.49□□□□□ -0.89
TNFRSF9-204ENST00000615230 CNR2P34972 360 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms