RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 VRK3Q8IV63 474 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 IQCKQ8N0W5 287 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 KRT222Q8N1A0 295 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 GALNT16Q8N428 558 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 LINC01555Q8NAE3 123 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 HMGCLL1Q8TB92 370 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 SELENOSQ9BQE4 189 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 MENTQ9BUN1 341 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 KIFC1Q9BW19 673 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 SLC26A1Q9H2B4 701 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 WDR54Q9H977 334 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 CUEDC1Q9NWM3 386 aaPredicted RBP11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 P4HTMQ9NXG6 502 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 SPATA7Q9P0W8 599 aa11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 PLEKHB1Q9UF11 243 aaPredicted RBP11.66□□□□□ -0.54
PDLIM2-218ENST00000614502 CRYBG3Q68DQ2 2970 aa11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 CTAGE9A4FU28 777 aa11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 HCRTR1O43613 425 aa11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 PHF2O75151 1096 aa11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 SEMA7AO75326 666 aa11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 C1orf105O95561 183 aa11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 ESR1P03372 595 aa11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 OGNP20774 298 aaKnown RBP11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 MMP11P24347 488 aa11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 ATP5DP30049 168 aa11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 ADARP55265 1226 aaKnown RBP11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 EIF3BP55884 814 aaKnown RBP11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 GRB7Q14451 532 aa11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 IGFL3Q6UXB1 125 aa11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 OVCH1Q7RTY7 1134 aa11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 LDB1Q86U70 411 aaPredicted RBP11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 CREG2Q8IUH2 290 aa11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 C17orf53Q8N3J3 647 aaPredicted RBP11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 ZADH2Q8N4Q0 377 aa11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 RBMXL3Q8N7X1 1067 aaKnown RBP11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 LMNTD1Q8N9Z9 388 aa11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 LKAAEAR1Q8TD35 194 aa11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 CUTCQ9NTM9 273 aa11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 UTP6Q9NYH9 597 aaKnown RBP11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 LUZP4Q9P127 313 aa11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 MAP10Q9P2G4 905 aa11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 SOX13Q9UN79 622 aa11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 B3GNT3Q9Y2A9 372 aa11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 NEU2Q9Y3R4 380 aa11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 KLK4Q9Y5K2 254 aa11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 SAR1BQ9Y6B6 198 aa11.65□□□□□ -0.54
PDLIM2-218ENST00000614502 DOCK10Q96BY6 2186 aa11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 MAGEB16A2A368 324 aa11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 ZNF839A8K0R7 811 aa11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 E5RI56 91 aa11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 VAPBO95292 243 aa11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 NMBRP28336 390 aa11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 CMPK1P30085 196 aa11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 HSD17B2P37059 387 aa11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 GCGRP47871 477 aa11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 ETF1P62495 437 aaKnown RBP11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 SLC9A5Q14940 896 aa11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 TYSND1Q2T9J0 566 aa11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 ANKRD20A4Q4UJ75 823 aa11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 FCRL6Q6DN72 434 aa11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 KIAA0930Q6ICG6 404 aaPredicted RBP11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 PRMT9Q6P2P2 845 aa11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 CCDC137Q6PK04 289 aaKnown RBP11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 TAX1BP1Q86VP1 789 aa11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 C2orf73Q8N5S3 287 aaPredicted RBP11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 ZNF285Q96NJ3 590 aa11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 IL17FQ96PD4 163 aa11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 MFRPQ9BY79 579 aa11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 ILKAPQ9H0C8 392 aaPredicted RBP11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 FAM114A2Q9NRY5 505 aa11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 SEMA3GQ9NS98 782 aa11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 SAMD15Q9P1V8 674 aa11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 MARCH4Q9P2E8 410 aaPredicted RBP11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 CDC23Q9UJX2 597 aa11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 HEATR5BQ9P2D3 2071 aa11.64□□□□□ -0.55
PDLIM2-218ENST00000614502 DOPEY1Q5JWR5 2465 aa11.63□□□□□ -0.55
PDLIM2-218ENST00000614502 GOLGA6L10A0A0M3HER8 536 aa11.63□□□□□ -0.55
PDLIM2-218ENST00000614502 A1L4Q6 167 aa11.63□□□□□ -0.55
PDLIM2-218ENST00000614502 FITM1A5D6W6 292 aa11.63□□□□□ -0.55
PDLIM2-218ENST00000614502 PRPF4O43172 522 aaKnown RBP eCLIP11.63□□□□□ -0.55
PDLIM2-218ENST00000614502 PRICKLE3O43900 615 aaPredicted RBP11.63□□□□□ -0.55
PDLIM2-218ENST00000614502 VPS26AO75436 327 aa11.63□□□□□ -0.55
PDLIM2-218ENST00000614502 CCNDBP1O95273 360 aa11.63□□□□□ -0.55
PDLIM2-218ENST00000614502 DDAH2O95865 285 aa11.63□□□□□ -0.55
PDLIM2-218ENST00000614502 KRT14P02533 472 aa11.63□□□□□ -0.55
PDLIM2-218ENST00000614502 UMODP07911 640 aa11.63□□□□□ -0.55
PDLIM2-218ENST00000614502 ERVK-10P10266 1014 aa11.63□□□□□ -0.55
PDLIM2-218ENST00000614502 CHRM3P20309 590 aa11.63□□□□□ -0.55
PDLIM2-218ENST00000614502 MGAT1P26572 445 aa11.63□□□□□ -0.55
PDLIM2-218ENST00000614502 FMO4P31512 558 aa11.63□□□□□ -0.55
PDLIM2-218ENST00000614502 GRIA3P42263 894 aa11.63□□□□□ -0.55
PDLIM2-218ENST00000614502 FNTAP49354 379 aa11.63□□□□□ -0.55
PDLIM2-218ENST00000614502 CARSP49589 748 aaKnown RBP11.63□□□□□ -0.55
PDLIM2-218ENST00000614502 CRADDP78560 199 aa11.63□□□□□ -0.55
PDLIM2-218ENST00000614502 OCA2Q04671 838 aa11.63□□□□□ -0.55
PDLIM2-218ENST00000614502 MRPL49Q13405 166 aaKnown RBP11.63□□□□□ -0.55
PDLIM2-218ENST00000614502 RAPSNQ13702 412 aa11.63□□□□□ -0.55
PDLIM2-218ENST00000614502 ARHGAP19Q14CB8 494 aa11.63□□□□□ -0.55
PDLIM2-218ENST00000614502 NKG7Q16617 165 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms