RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 FXYD1O00168 92 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 MYL12BO14950 172 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 BCAS1O75363 584 aaPredicted RBP6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 STC2O76061 302 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 OAZ2O95190 189 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 TGFB1P01137 390 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 TNNI3P19429 210 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 DCTP40126 519 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 STK19P49842 368 aaPredicted RBP6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 RPS3AP61247 264 aaKnown RBP6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 ELP6Q0PNE2 266 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 DSC3Q14574 896 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 TAB1Q15750 504 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 TIGD6Q17RP2 521 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 CLLU1OSQ5K130 101 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 LRRC66Q68CR7 880 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 TSPAN33Q86UF1 283 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 RAVER1Q8IY67 606 aaKnown RBP6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 BEND7Q8N7W2 519 aaPredicted RBP6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 ZBTB8BQ8NAP8 495 aaPredicted RBP6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 OR8J3Q8NGG0 315 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 SGCDQ92629 289 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 SLC39A13Q96H72 371 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 EGLN2Q96KS0 407 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 ZNF641Q96N77 438 aaPredicted RBP6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 SMG9Q9H0W8 520 aaKnown RBP6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 TPT1P8Q9HAU6 139 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 FAIMQ9NVQ4 179 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 CLN6Q9NWW5 311 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 H2AFY2Q9P0M6 372 aaPredicted RBP6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 PCDHB14Q9Y5E9 798 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 SIPA1L1O43166 1804 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 FOCADQ5VW36 1801 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 ATAD5Q96QE3 1844 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 TAF4O00268 1085 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 ARHGEF9O43307 516 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 NPPAP01160 153 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 VIPP01282 170 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 CCDC159P0C7I6 412 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 EBLN1P0CF75 366 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 CD247P20963 164 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 PRPS1L1P21108 318 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 DNAJA1P31689 397 aaKnown RBP6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 HNF1BP35680 557 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 MAGEA11P43364 429 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 SP3Q02447 781 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 ABHD18Q0P651 414 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 GRIK2Q13002 908 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 SLC13A2Q13183 592 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 NCF4Q15080 339 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 TBC1D25Q3MII6 688 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 COQ5Q5HYK3 327 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 PDZK1Q5T2W1 519 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 NADSYN1Q6IA69 706 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 BEND5Q7L4P6 421 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 MRPL10Q7Z7H8 261 aaKnown RBP6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 AKAP14Q86UN6 197 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 IFNL1Q8IU54 200 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 SPARTQ8N0X7 666 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 DEPDC4Q8N2C3 294 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 RNF175Q8N4F7 328 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 CAMKK1Q8N5S9 505 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 ATL1Q8WXF7 558 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 PLD4Q96BZ4 506 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 MGME1Q9BQP7 344 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 WRAP53Q9BUR4 548 aaKnown RBP6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 TEX12Q9BXU0 123 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 NLNQ9BYT8 704 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 RHCGQ9UBD6 479 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 VPS29Q9UBQ0 182 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 ERGIC3Q9Y282 383 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 KLHL20Q9Y2M5 609 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 GMEB1Q9Y692 573 aa6.69□□□□□ -1.34
SYNPO2-206ENST00000610556 GREB1LQ9C091 1923 aaPredicted RBP6.68□□□□□ -1.34
SYNPO2-206ENST00000610556 TTC3P53804 2025 aa6.68□□□□□ -1.34
SYNPO2-206ENST00000610556 FUOMA2VDF0 154 aa6.68□□□□□ -1.34
SYNPO2-206ENST00000610556 KRT87PA6NCN2 255 aa6.68□□□□□ -1.34
SYNPO2-206ENST00000610556 M0QX08 132 aa6.68□□□□□ -1.34
SYNPO2-206ENST00000610556 TNFRSF10BO14763 440 aa6.68□□□□□ -1.34
SYNPO2-206ENST00000610556 SLC22A1O15245 554 aa6.68□□□□□ -1.34
SYNPO2-206ENST00000610556 CCNDBP1O95273 360 aa6.68□□□□□ -1.34
SYNPO2-206ENST00000610556 MMP2P08253 660 aa6.68□□□□□ -1.34
SYNPO2-206ENST00000610556 POLR2EP19388 210 aaKnown RBP6.68□□□□□ -1.34
SYNPO2-206ENST00000610556 TNFRSF1BP20333 461 aa6.68□□□□□ -1.34
SYNPO2-206ENST00000610556 ZNF140P52738 457 aaPredicted RBP6.68□□□□□ -1.34
SYNPO2-206ENST00000610556 FPGSQ05932 587 aa6.68□□□□□ -1.34
SYNPO2-206ENST00000610556 RING1Q06587 406 aa6.68□□□□□ -1.34
SYNPO2-206ENST00000610556 SMARCB1Q12824 385 aa6.68□□□□□ -1.34
SYNPO2-206ENST00000610556 KRR1Q13601 381 aaKnown RBP6.68□□□□□ -1.34
SYNPO2-206ENST00000610556 COL9A2Q14055 689 aaPredicted RBP6.68□□□□□ -1.34
SYNPO2-206ENST00000610556 ARHGEF6Q15052 776 aa6.68□□□□□ -1.34
SYNPO2-206ENST00000610556 UGT3A2Q3SY77 523 aa6.68□□□□□ -1.34
SYNPO2-206ENST00000610556 ZNF648Q5T619 568 aaPredicted RBP6.68□□□□□ -1.34
SYNPO2-206ENST00000610556 RAET1GQ6H3X3 334 aa6.68□□□□□ -1.34
SYNPO2-206ENST00000610556 ERICH5Q6P6B1 374 aa6.68□□□□□ -1.34
SYNPO2-206ENST00000610556 TRIM40Q6P9F5 258 aa6.68□□□□□ -1.34
SYNPO2-206ENST00000610556 Q6ZVU0 165 aa6.68□□□□□ -1.34
SYNPO2-206ENST00000610556 CYP4Z1Q86W10 505 aa6.68□□□□□ -1.34
SYNPO2-206ENST00000610556 NPAS4Q8IUM7 802 aa6.68□□□□□ -1.34
SYNPO2-206ENST00000610556 CFAP206Q8IYR0 622 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms