RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 VSX2P58304 361 aaPredicted RBP12.81□□□□□ -0.36
POLR2J3-219ENST00000608621 CRADDP78560 199 aa12.81□□□□□ -0.36
POLR2J3-219ENST00000608621 AGAP7PQ5VUJ5 663 aa12.81□□□□□ -0.36
POLR2J3-219ENST00000608621 ZNF787Q6DD87 383 aa12.81□□□□□ -0.36
POLR2J3-219ENST00000608621 FRMPD2BQ6IN97 320 aa12.81□□□□□ -0.36
POLR2J3-219ENST00000608621 IGFL2Q6UWQ7 119 aa12.81□□□□□ -0.36
POLR2J3-219ENST00000608621 DTWD1Q8N5C7 304 aa12.81□□□□□ -0.36
POLR2J3-219ENST00000608621 RNF10Q8N5U6 811 aaKnown RBP12.81□□□□□ -0.36
POLR2J3-219ENST00000608621 METTL27Q8N6F8 245 aaPredicted RBP12.81□□□□□ -0.36
POLR2J3-219ENST00000608621 CCDC89Q8N998 374 aa12.81□□□□□ -0.36
POLR2J3-219ENST00000608621 GSDMBQ8TAX9 411 aa12.81□□□□□ -0.36
POLR2J3-219ENST00000608621 SKA2Q8WVK7 121 aaPredicted RBP12.81□□□□□ -0.36
POLR2J3-219ENST00000608621 C5orf34Q96MH7 638 aa12.81□□□□□ -0.36
POLR2J3-219ENST00000608621 AGAP4Q96P64 663 aa12.81□□□□□ -0.36
POLR2J3-219ENST00000608621 PANX3Q96QZ0 392 aa12.81□□□□□ -0.36
POLR2J3-219ENST00000608621 WDR77Q9BQA1 342 aaPredicted RBP12.81□□□□□ -0.36
POLR2J3-219ENST00000608621 AGPAT4Q9NRZ5 378 aa12.81□□□□□ -0.36
POLR2J3-219ENST00000608621 IL1RAPL1Q9NZN1 696 aa12.81□□□□□ -0.36
POLR2J3-219ENST00000608621 PAK5Q9P286 719 aa12.81□□□□□ -0.36
POLR2J3-219ENST00000608621 CTSFQ9UBX1 484 aa12.81□□□□□ -0.36
POLR2J3-219ENST00000608621 ZC3H7BQ9UGR2 993 aaKnown RBP12.81□□□□□ -0.36
POLR2J3-219ENST00000608621 MAU2Q9Y6X3 613 aa12.81□□□□□ -0.36
POLR2J3-219ENST00000608621 CENPEQ02224 2701 aa12.81□□□□□ -0.36
POLR2J3-219ENST00000608621 DOPEY1Q5JWR5 2465 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 A0A0J9YVX5 310 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 HYKKA2RU49 373 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 FITM1A5D6W6 292 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 KRT87PA6NCN2 255 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 VSTM2BA6NLU5 285 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 KPNA5O15131 536 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 PSMB5P28074 263 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 NMBRP28336 390 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 BDKRB1P46663 353 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 RBBP7Q16576 425 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 TUBB8Q3ZCM7 444 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 IRAK1BP1Q5VVH5 260 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 OTOAQ7RTW8 1153 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 KCNMB4Q86W47 210 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 OR2A1Q8NGT9 310 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 PPP4R1Q8TF05 950 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 UBE2Q2Q8WVN8 375 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 MIPEPQ99797 713 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 RAB11FIP5Q9BXF6 653 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 LHPPQ9H008 270 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 MRM3Q9HC36 420 aaKnown RBP12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 ZNF304Q9HCX3 659 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 ENAMQ9NRM1 1142 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 SEMA3GQ9NS98 782 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 TREX1Q9NSU2 369 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 STOX2Q9P2F5 926 aaPredicted RBP12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 GNPTGQ9UJJ9 305 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 NXT1Q9UKK6 140 aaKnown RBP12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 NOVA2Q9UNW9 492 aaKnown RBP12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 RUVBL2Q9Y230 463 aaKnown RBP12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 NUP210LQ5VU65 1888 aa12.8□□□□□ -0.36
POLR2J3-219ENST00000608621 PCM1Q15154 2024 aa12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 ITPR2Q14571 2701 aa12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 LOC105369274A0A096LPK9 316 aa12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 LOC102723532A0A0G2JNH3 316 aa12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 NRP2O60462 931 aa12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 MED26O95402 600 aa12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 RPS3P23396 243 aaKnown RBP eCLIP12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 DCTP40126 519 aa12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 NPY2RP49146 381 aa12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 EIF3BP55884 814 aaKnown RBP12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 YBX1P67809 324 aaKnown RBP12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 Q0VFX4 171 aa12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 CNSTQ6PJW8 725 aa12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 OR4N4Q8N0Y3 316 aa12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 RAB42Q8N4Z0 105 aa12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 ST6GALNAC3Q8NDV1 305 aa12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 OR2L3Q8NG85 312 aa12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 OR11G2Q8NGC1 345 aa12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 HMGCLL1Q8TB92 370 aa12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 STT3BQ8TCJ2 826 aa12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 THOC3Q96J01 351 aaKnown RBP12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 VPS50Q96JG6 964 aa12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 FOPNLQ96NB1 174 aa12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 MESP1Q9BRJ9 268 aa12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 GUCA1BQ9UMX6 200 aa12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 DRG1Q9Y295 367 aaKnown RBP12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 MRFAP1Q9Y605 127 aa12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 POLEQ07864 2286 aa12.79□□□□□ -0.36
POLR2J3-219ENST00000608621 A0A1W2PPV9 198 aa12.78□□□□□ -0.36
POLR2J3-219ENST00000608621 KLHL18O94889 574 aa12.78□□□□□ -0.36
POLR2J3-219ENST00000608621 EIF2S1P05198 315 aaKnown RBP12.78□□□□□ -0.36
POLR2J3-219ENST00000608621 FMO4P31512 558 aa12.78□□□□□ -0.36
POLR2J3-219ENST00000608621 CCNFP41002 786 aa12.78□□□□□ -0.36
POLR2J3-219ENST00000608621 OCA2Q04671 838 aa12.78□□□□□ -0.36
POLR2J3-219ENST00000608621 KLC1Q07866 573 aa12.78□□□□□ -0.36
POLR2J3-219ENST00000608621 CDC16Q13042 620 aa12.78□□□□□ -0.36
POLR2J3-219ENST00000608621 FASTKQ14296 549 aaKnown RBP12.78□□□□□ -0.36
POLR2J3-219ENST00000608621 ZNF169Q14929 603 aaPredicted RBP12.78□□□□□ -0.36
POLR2J3-219ENST00000608621 SIX1Q15475 284 aaPredicted RBP12.78□□□□□ -0.36
POLR2J3-219ENST00000608621 CCNG2Q16589 344 aa12.78□□□□□ -0.36
POLR2J3-219ENST00000608621 CTSL3PQ5NE16 218 aa12.78□□□□□ -0.36
POLR2J3-219ENST00000608621 FBXO42Q6P3S6 717 aa12.78□□□□□ -0.36
POLR2J3-219ENST00000608621 CES3Q6UWW8 571 aa12.78□□□□□ -0.36
POLR2J3-219ENST00000608621 LINC00696Q6ZRV3 163 aa12.78□□□□□ -0.36
POLR2J3-219ENST00000608621 LRRC6Q86X45 466 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms