RNA–Protein interactions for RNA: ENST00000603189.1

MRPS35P3-201, Transcript of mitochondrial ribosomal protein S35 pseudogene 3, humanhuman

BASIC

Gene MRPS35P3, Length 709 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35P3-201ENST00000603189 HMGB1P1B2RPK0 211 aaPredicted RBP4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 PGRMC1O00264 195 aaKnown RBP4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 NDC80O14777 642 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 PPIP5K2O43314 1243 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 SHOX2O60902 331 aaPredicted RBP4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 ZBED4O75132 1171 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 PALMO75781 387 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 AKAP3O75969 853 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 ZNF432O94892 652 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 PMS2P2O95744 297 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 FAM228BP0C875 321 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 SRCP12931 536 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 HSPA1LP34931 641 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 QARSP47897 775 aaKnown RBP4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 LMAN1P49257 510 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 FMO5P49326 533 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 KLK7P49862 253 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 GTF2BQ00403 316 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 ZNF155Q12901 538 aaPredicted RBP4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 SF3B4Q15427 424 aaKnown RBP eCLIP4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 SOWAHCQ53LP3 525 aaPredicted RBP4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 KCTD18Q6PI47 426 aaPredicted RBP4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 GSTA5Q7RTV2 222 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 MIER3Q7Z3K6 550 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 NELFCDQ8IXH7 590 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 SYCP3Q8IZU3 236 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 RASGEF1CQ8N431 466 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 UBL4BQ8N7F7 174 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 FAM133AQ8N9E0 248 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 KIFAP3Q92845 792 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 ARHGEF2Q92974 986 aaKnown RBP4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 GRAMD2BQ96HH9 432 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 CAPZA3Q96KX2 299 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 C3orf30Q96M34 536 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 TMEM68Q96MH6 324 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 OR1F2PQ96R84 312 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 LRRC1Q9BTT6 524 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 RAB17Q9H0T7 212 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 CARD9Q9H257 536 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 TDRD3Q9H7E2 651 aaKnown RBP4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 DDX31Q9H8H2 851 aaKnown RBP4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 SEBOXQ9HB31 216 aaPredicted RBP4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 RANGRFQ9HD47 186 aaPredicted RBP4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 ZCCHC17Q9NP64 241 aaKnown RBP4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 KRT84Q9NSB2 600 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 HOMER3Q9NSC5 361 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 ACSS1Q9NUB1 689 aaPredicted RBP4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 SMARCAL1Q9NZC9 954 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 TRIM10Q9UDY6 481 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 SIX4Q9UIU6 781 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 PADI3Q9ULW8 664 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 NENFQ9UMX5 172 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 UTP11Q9Y3A2 253 aaKnown RBP4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 MYH8P13535 1937 aa4.3□□□□□ -1.72
MRPS35P3-201ENST00000603189 DENND3A2RUS2 1198 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 LRRIQ3A6PVS8 624 aaPredicted RBP4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 C19orf81C9J6K1 198 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 ZNF587BE7ETH6 402 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 H3BQF6 201 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 TULP2O00295 520 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 EPHB6O15197 1021 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 RTN2O75298 545 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 RNASEH2AO75792 299 aaKnown RBP4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 PLEKP08567 350 aaPredicted RBP4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 CDH2P19022 906 aaPredicted RBP4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 HOXD13P35453 343 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 HSPA9P38646 679 aaKnown RBP4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 AP3M2P53677 418 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 MFAP3P55082 362 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 PSMC5P62195 406 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 PSMC6P62333 389 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 SLC20A2Q08357 652 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 NIPAL4Q0D2K0 466 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 BFSP1Q12934 665 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 SNTA1Q13424 505 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 CTF1Q16619 201 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 USH1GQ495M9 461 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 SEPT14Q6ZU15 432 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 ZNF571Q7Z3V5 609 aaPredicted RBP4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 ZNF329Q86UD4 541 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 ZNF677Q86XU0 584 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 NRROSQ86YC3 692 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 BEST3Q8N1M1 668 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 PCDH20Q8N6Y1 951 aaKnown RBP4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 XXYLT1Q8NBI6 393 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 TANKQ92844 425 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 MTBPQ96DY7 904 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 EEF2KMTQ96G04 330 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 HES6Q96HZ4 224 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 ZBED3Q96IU2 234 aaPredicted RBP4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 C1orf74Q96LT6 269 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 CCDC43Q96MW1 224 aaKnown RBP4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 INPP4AQ96PE3 977 aaPredicted RBP4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 PCYT2Q99447 389 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 CHCHD6Q9BRQ6 235 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 PCGF1Q9BSM1 259 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 C1QTNF4Q9BXJ3 329 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 CAPS2Q9BXY5 557 aa4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 STMN4Q9H169 189 aaPredicted RBP4.29□□□□□ -1.72
MRPS35P3-201ENST00000603189 PCDH9Q9HC56 1237 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms