RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 TNFRSF10DQ9UBN6 386 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 CYTH4Q9UIA0 394 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 CDH10Q9Y6N8 788 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 ENPP3O14638 875 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 CRISP3P54108 245 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 BNIP3Q12983 259 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 RHEBQ15382 184 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 SH3D19Q5HYK7 790 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 ARL9Q6T311 187 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 LRRC70Q7Z2Q7 622 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 PCDHAC1Q9H158 963 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 AMBNQ9NP70 447 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 RDH8Q9NYR8 311 aa9.41□□□□□ -0.9
CSMD1-217ENST00000602723 TLR4O00206 839 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 PRNPP04156 253 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 TACR2P21452 398 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 CCKBRP32239 447 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 ARL3P36405 182 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 PGDP52209 483 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 NFKB2Q00653 900 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 GRK1Q15835 563 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 PSRC1Q6PGN9 363 aaPredicted RBP9.4□□□□□ -0.9
CSMD1-217ENST00000602723 THUMPD1Q9NXG2 353 aaKnown RBP9.4□□□□□ -0.9
CSMD1-217ENST00000602723 TBC1D14Q9P2M4 693 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 PDLIM1O00151 329 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 RP2O75695 350 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 FUT4P22083 530 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 SSX6Q7RTT6 188 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 LNX2Q8N448 690 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 PPM1HQ9ULR3 514 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 RNF225M0QZC1 329 aaPredicted RBP9.4□□□□□ -0.9
CSMD1-217ENST00000602723 CD48P09326 243 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 SPATA31D3P0C874 917 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 HK1P19367 917 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 ATAT1Q5SQI0 421 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 HAGHLQ6PII5 290 aaPredicted RBP9.4□□□□□ -0.9
CSMD1-217ENST00000602723 SPATA31D4Q6ZUB0 917 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 SLC22A15Q8IZD6 547 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 PYROXD2Q8N2H3 581 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 GRHL3Q8TE85 626 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 SMURF1Q9HCE7 757 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 TBX10O75333 385 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 BPNT1O95861 308 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 MT-CYBP00156 380 aaPredicted RBP9.4□□□□□ -0.9
CSMD1-217ENST00000602723 APODP05090 189 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 VAMP1P23763 118 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 HSD11B1P28845 292 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 SLC9A3P48764 834 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 TMED4Q7Z7H5 227 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 DNAJB8Q8NHS0 232 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 FAM110BQ8TC76 370 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 CD84Q9UIB8 345 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 GABRR2P28476 465 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 PBX3P40426 434 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 RPA4Q13156 261 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 DACT2Q5SW24 774 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 ANO7Q6IWH7 933 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 LGI4Q8N135 537 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 PCDHGA11Q9Y5H2 935 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 SPTA1P02549 2419 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 ILVBLA1L0T0 632 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 SAP18O00422 153 aaKnown RBP9.4□□□□□ -0.9
CSMD1-217ENST00000602723 CYP17A1P05093 508 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 NSG1P42857 185 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 TUSC3Q13454 348 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 OR2T5Q6IEZ7 315 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 PTF1AQ7RTS3 328 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 ZNF527Q8NB42 609 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 OR2T29Q8NH02 315 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 FAM84AQ96KN4 292 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 NDC1Q9BTX1 674 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 GTPBP2Q9BX10 602 aaKnown RBP9.4□□□□□ -0.9
CSMD1-217ENST00000602723 FAM83DQ9H4H8 585 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 FAM105AQ9NUU6 356 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 SEC14L4Q9UDX3 406 aa9.4□□□□□ -0.9
CSMD1-217ENST00000602723 CKAP5Q14008 2032 aa9.4□□□□□ -0.91
CSMD1-217ENST00000602723 SNAPC5O75971 98 aa9.4□□□□□ -0.91
CSMD1-217ENST00000602723 PRKCHP24723 683 aa9.4□□□□□ -0.91
CSMD1-217ENST00000602723 PTGIRP43119 386 aa9.4□□□□□ -0.91
CSMD1-217ENST00000602723 PLA2G16P53816 162 aa9.4□□□□□ -0.91
CSMD1-217ENST00000602723 OR12D2P58182 307 aa9.4□□□□□ -0.91
CSMD1-217ENST00000602723 SPIN3Q5JUX0 258 aa9.4□□□□□ -0.91
CSMD1-217ENST00000602723 TMEM198Q66K66 360 aa9.4□□□□□ -0.91
CSMD1-217ENST00000602723 PAQR7Q86WK9 346 aa9.4□□□□□ -0.91
CSMD1-217ENST00000602723 CEP97Q8IW35 865 aa9.4□□□□□ -0.91
CSMD1-217ENST00000602723 SNIP1Q8TAD8 396 aaKnown RBP9.4□□□□□ -0.91
CSMD1-217ENST00000602723 NCSTNQ92542 709 aa9.4□□□□□ -0.91
CSMD1-217ENST00000602723 PMEPA1Q969W9 287 aa9.4□□□□□ -0.91
CSMD1-217ENST00000602723 PLD4Q96BZ4 506 aa9.4□□□□□ -0.91
CSMD1-217ENST00000602723 AP1S3Q96PC3 154 aa9.4□□□□□ -0.91
CSMD1-217ENST00000602723 AURKAO14965 403 aa9.4□□□□□ -0.91
CSMD1-217ENST00000602723 SRPRAP08240 638 aaKnown RBP9.4□□□□□ -0.91
CSMD1-217ENST00000602723 AFF1P51825 1210 aaKnown RBP9.4□□□□□ -0.91
CSMD1-217ENST00000602723 CHAF1BQ13112 559 aa9.4□□□□□ -0.91
CSMD1-217ENST00000602723 TOR1AIP1Q5JTV8 583 aa9.4□□□□□ -0.91
CSMD1-217ENST00000602723 TSTD2Q5T7W7 516 aa9.4□□□□□ -0.91
CSMD1-217ENST00000602723 MAP1SQ66K74 1059 aaPredicted RBP9.4□□□□□ -0.91
CSMD1-217ENST00000602723 ZNF431Q8TF32 576 aaPredicted RBP9.4□□□□□ -0.91
CSMD1-217ENST00000602723 TESCQ96BS2 214 aa9.4□□□□□ -0.91
CSMD1-217ENST00000602723 FAM124BQ9H5Z6 455 aaPredicted RBP9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms