RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 GSX1Q9H4S2 264 aaPredicted RBP8.66□□□□□ -1.02
COMMD3-215ENST00000602574 ALG2Q9H553 416 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 MPP6Q9NZW5 540 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 SCP2D1Q9UJQ7 156 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 CDV3Q9UKY7 258 aaKnown RBP8.66□□□□□ -1.02
COMMD3-215ENST00000602574 USP18Q9UMW8 372 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 LAMB2P55268 1798 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 KDM4EB2RXH2 506 aaPredicted RBP8.66□□□□□ -1.02
COMMD3-215ENST00000602574 H7C1Q1 480 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 J3KRW8 73 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 FSCN2O14926 492 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 TSPAN2O60636 221 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 TSPAN3O60637 253 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 GLRA3O75311 464 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 GOSR1O95249 250 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 C22orf31O95567 290 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 ANGPTL1O95841 491 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 LALBAP00709 142 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 FOLR2P14207 255 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 HDCP19113 662 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 FGFR3P22607 806 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 RPS3P23396 243 aaKnown RBP eCLIP8.66□□□□□ -1.02
COMMD3-215ENST00000602574 GIFP27352 417 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 TACR3P29371 465 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 MAPK9P45984 424 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 RARRES1P49788 294 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 ADPRHP54922 357 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 TAP2Q03519 686 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 GPR17Q13304 367 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 CYBRD1Q53TN4 286 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 ACER2Q5QJU3 275 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 FAXCQ5TGI0 409 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 SH2D5Q6ZV89 423 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 CCDC190Q86UF4 302 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 TMC8Q8IU68 726 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 SLC35F3Q8IY50 421 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 ATPAF2Q8N5M1 289 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 C10orf53Q8N6V4 93 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 ADAMTS14Q8WXS8 1223 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 TMBIM1Q969X1 311 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 FAM71F1Q96KD3 344 aaPredicted RBP8.66□□□□□ -1.02
COMMD3-215ENST00000602574 CCDC90BQ9GZT6 254 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 PUS7LQ9H0K6 701 aaKnown RBP8.66□□□□□ -1.02
COMMD3-215ENST00000602574 RNF121Q9H920 327 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 SARS2Q9NP81 518 aaKnown RBP8.66□□□□□ -1.02
COMMD3-215ENST00000602574 ENTPD7Q9NQZ7 604 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 SEC14L4Q9UDX3 406 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 PISDQ9UG56 409 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 ZMYM5Q9UJ78 669 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 POLR3HQ9Y535 204 aaPredicted RBP8.66□□□□□ -1.02
COMMD3-215ENST00000602574 LYVE1Q9Y5Y7 322 aa8.66□□□□□ -1.02
COMMD3-215ENST00000602574 M0QYV0 167 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 GSTA4O15217 222 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 PRPSAP2O60256 369 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 HCN1O60741 890 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 MITFO75030 526 aaPredicted RBP8.65□□□□□ -1.02
COMMD3-215ENST00000602574 CNTN5O94779 1100 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 WDR47O94967 919 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 NR2C1P13056 603 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 LCP1P13796 627 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 CD46P15529 392 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 DSG3P32926 999 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 BAG6P46379 1132 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 ANXA11P50995 505 aaKnown RBP8.65□□□□□ -1.02
COMMD3-215ENST00000602574 CD81P60033 236 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 PSME3P61289 254 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 TIMM10P62072 90 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 MVKQ03426 396 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 KLF10Q13118 480 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 ZNHIT3Q15649 155 aaPredicted RBP8.65□□□□□ -1.02
COMMD3-215ENST00000602574 TMEM35AQ53FP2 167 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 ANKRD22Q5VYY1 191 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 FRMPD2BQ6IN97 320 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 WDR73Q6P4I2 378 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 TMPRSS11FQ6ZWK6 438 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 SERINC5Q86VE9 423 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 MAP4K3Q8IVH8 894 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 FAM178BQ8IXR5 827 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 SLC22A15Q8IZD6 547 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 CCDC24Q8N4L8 307 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 ZNF561Q8N587 486 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 ARRDC1Q8N5I2 433 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 FAR1Q8WVX9 515 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 SLC39A7Q92504 469 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 SGCZQ96LD1 299 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 ZNF385AQ96PM9 386 aaKnown RBP8.65□□□□□ -1.02
COMMD3-215ENST00000602574 DPH7Q9BTV6 452 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 KATNB1Q9BVA0 655 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 NFKBIZQ9BYH8 718 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 ZNF436Q9C0F3 470 aaPredicted RBP8.65□□□□□ -1.02
COMMD3-215ENST00000602574 MS4A7Q9GZW8 240 aaPredicted RBP8.65□□□□□ -1.02
COMMD3-215ENST00000602574 SDCBP2Q9H190 292 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 GAL3ST2Q9H3Q3 398 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 PCDH9Q9HC56 1237 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 NANSQ9NR45 359 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 ARPP21Q9UBL0 812 aaPredicted RBP8.65□□□□□ -1.02
COMMD3-215ENST00000602574 ADAMTSL3P82987 1691 aa8.65□□□□□ -1.02
COMMD3-215ENST00000602574 SERTM1A2A2V5 107 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 FAM86C2PA6NEL3 165 aa8.65□□□□□ -1.03
COMMD3-215ENST00000602574 WWP2O00308 870 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms