RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 CEP250Q9BV73 2442 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 EEF1E1O43324 174 aaKnown RBP8.52□□□□□ -1.05
CSMD1-216ENST00000602557 ABCB7O75027 752 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 GBE1Q04446 702 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 GPR68Q15743 365 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 ZACNQ401N2 412 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 VTCN1Q7Z7D3 282 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 LIX1Q8N485 282 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 POLR2J2Q9GZM3 115 aaKnown RBP8.52□□□□□ -1.05
CSMD1-216ENST00000602557 RANBP3Q9H6Z4 567 aaPredicted RBP8.52□□□□□ -1.05
CSMD1-216ENST00000602557 PCDHB16Q9NRJ7 776 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 LOXHD1Q8IVV2 1947 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 FSCN2O14926 492 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 STK16O75716 305 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 STBD1O95210 358 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 ENDOUP21128 410 aaKnown RBP8.52□□□□□ -1.05
CSMD1-216ENST00000602557 IGFALSP35858 605 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 PBX1P40424 430 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 GRIK5Q16478 980 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 KCTD9Q7L273 389 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 SPATA19Q7Z5L4 167 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 OR10Q1Q8NGQ4 319 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 KLHL6Q8WZ60 621 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 PIWIL1Q96J94 861 aaKnown RBP8.52□□□□□ -1.05
CSMD1-216ENST00000602557 MTFR1LQ9H019 292 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 MARK1Q9P0L2 795 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 DNAJB4Q9UDY4 337 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 NAV1Q8NEY1 1877 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 PITPNM1O00562 1244 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 ANXA3P12429 323 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 ECHS1P30084 290 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 HNRNPFP52597 415 aaKnown RBP8.52□□□□□ -1.05
CSMD1-216ENST00000602557 DGKZQ13574 1117 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 RFTN2Q52LD8 501 aaPredicted RBP8.52□□□□□ -1.05
CSMD1-216ENST00000602557 ADGRD1Q6QNK2 874 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 HBEGFQ99075 208 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 ITPAQ9BY32 194 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 CHRAC1Q9NRG0 131 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 MGAT4CQ9UBM8 478 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 ERVK-19Q9WJR5 959 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 NR2E1Q9Y466 385 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 RAI2Q9Y5P3 530 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 A6NL46 340 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 CABYRO75952 493 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 ADH1AP07327 375 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 DSG2Q14126 1118 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 IQCCQ4KMZ1 466 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 ZNF280BQ86YH2 543 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 METTL25Q8N6Q8 603 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 SLC16A10Q8TF71 515 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 MKL1Q969V6 931 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 GFOD1Q9NXC2 390 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 ACTR3BQ9P1U1 418 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 NOP16Q9Y3C1 178 aaKnown RBP8.52□□□□□ -1.05
CSMD1-216ENST00000602557 PCCBP05166 539 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 HNRNPH3P31942 346 aaKnown RBP8.52□□□□□ -1.05
CSMD1-216ENST00000602557 C9orf64Q5T6V5 341 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 KIAA1161Q6NSJ0 714 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 JOSD2Q8TAC2 188 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 OR8D1Q8WZ84 308 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 TRMOQ9BU70 441 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 ZNF395Q9H8N7 513 aaPredicted RBP8.52□□□□□ -1.05
CSMD1-216ENST00000602557 CDKN2BP42772 138 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 CATSPERGQ6ZRH7 1159 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 OR10H5Q8NGA6 315 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 PCDHB18PQ96TA0 734 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 SLA2Q9H6Q3 261 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 BIN3Q9NQY0 253 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 FAM198AQ9UFP1 575 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 PCDHGB3Q9Y5G1 929 aa8.52□□□□□ -1.05
CSMD1-216ENST00000602557 INMT-MINDY4F8WBC2 141 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 H3BSH0 61 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 HCN1O60741 890 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 HOXC6P09630 235 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 IGFBP4P22692 258 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 MMP8P22894 467 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 PTPN6P29350 595 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 CSTF2P33240 577 aaKnown RBP eCLIP8.51□□□□□ -1.05
CSMD1-216ENST00000602557 CASP7P55210 303 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 FGL1Q08830 312 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 ATAD3CQ5T2N8 411 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 ELP2Q6IA86 826 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 LINGO4Q6UY18 593 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 MON1BQ7L1V2 547 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 PLPPR4Q7Z2D5 763 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 TICAM1Q8IUC6 712 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 TOP6BLQ8N6T0 577 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 TTPALQ9BTX7 342 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 C3orf14Q9HBI5 128 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 TMEM9Q9P0T7 183 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 F5P12259 2224 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 QSOX1O00391 747 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 C1RP00736 705 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 FGBP02675 491 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 IFNW1P05000 195 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 TPSB2P20231 275 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 ZNF132P52740 706 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 SULT2A1Q06520 285 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 TPSAB1Q15661 275 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 ESRP1Q6NXG1 681 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms