RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 LINGO1Q96FE5 620 aa15.15■□□□□ 0.02
RPS28-203ENST00000600659 VPS39Q96JC1 886 aa15.15■□□□□ 0.02
RPS28-203ENST00000600659 SLC45A3Q96JT2 553 aa15.15■□□□□ 0.02
RPS28-203ENST00000600659 MIPEPQ99797 713 aa15.15■□□□□ 0.02
RPS28-203ENST00000600659 RHOJQ9H4E5 214 aa15.15■□□□□ 0.02
RPS28-203ENST00000600659 SLC6A20Q9NP91 592 aa15.15■□□□□ 0.02
RPS28-203ENST00000600659 ENAMQ9NRM1 1142 aa15.15■□□□□ 0.02
RPS28-203ENST00000600659 FAM114A2Q9NRY5 505 aa15.15■□□□□ 0.02
RPS28-203ENST00000600659 PCMTD2Q9NV79 361 aa15.15■□□□□ 0.02
RPS28-203ENST00000600659 CROTQ9UKG9 612 aa15.15■□□□□ 0.02
RPS28-203ENST00000600659 PDE10AQ9Y233 779 aa15.15■□□□□ 0.02
RPS28-203ENST00000600659 MRPS18BQ9Y676 258 aaKnown RBP15.15■□□□□ 0.02
RPS28-203ENST00000600659 CTSVO60911 334 aa15.14■□□□□ 0.01
RPS28-203ENST00000600659 FKBP9O95302 570 aa15.14■□□□□ 0.01
RPS28-203ENST00000600659 CAPN1P07384 714 aa15.14■□□□□ 0.01
RPS28-203ENST00000600659 GSTA2P09210 222 aa15.14■□□□□ 0.01
RPS28-203ENST00000600659 PNLIPRP1P54315 467 aa15.14■□□□□ 0.01
RPS28-203ENST00000600659 ITGA1P56199 1179 aa15.14■□□□□ 0.01
RPS28-203ENST00000600659 CYP4F2P78329 520 aa15.14■□□□□ 0.01
RPS28-203ENST00000600659 SOWAHCQ53LP3 525 aaPredicted RBP15.14■□□□□ 0.01
RPS28-203ENST00000600659 LRRC8EQ6NSJ5 796 aa15.14■□□□□ 0.01
RPS28-203ENST00000600659 FAM199XQ6PEV8 388 aaPredicted RBP15.14■□□□□ 0.01
RPS28-203ENST00000600659 FIGLAQ6QHK4 219 aa15.14■□□□□ 0.01
RPS28-203ENST00000600659 C3orf62Q6ZUJ4 267 aa15.14■□□□□ 0.01
RPS28-203ENST00000600659 CCDC25Q86WR0 208 aa15.14■□□□□ 0.01
RPS28-203ENST00000600659 TMEM126BQ8IUX1 230 aa15.14■□□□□ 0.01
RPS28-203ENST00000600659 CEP97Q8IW35 865 aa15.14■□□□□ 0.01
RPS28-203ENST00000600659 PALM2Q8IXS6 379 aa15.14■□□□□ 0.01
RPS28-203ENST00000600659 DSELQ8IZU8 1212 aa15.14■□□□□ 0.01
RPS28-203ENST00000600659 LRRN4CLQ8ND94 238 aa15.14■□□□□ 0.01
RPS28-203ENST00000600659 SMPDL3AQ92484 453 aa15.14■□□□□ 0.01
RPS28-203ENST00000600659 ZNF285Q96NJ3 590 aa15.14■□□□□ 0.01
RPS28-203ENST00000600659 SPRTNQ9H040 489 aaPredicted RBP15.14■□□□□ 0.01
RPS28-203ENST00000600659 FANCEQ9HB96 536 aa15.14■□□□□ 0.01
RPS28-203ENST00000600659 WDR70Q9NW82 654 aa15.14■□□□□ 0.01
RPS28-203ENST00000600659 NSMCE4AQ9NXX6 385 aa15.14■□□□□ 0.01
RPS28-203ENST00000600659 PCSK5Q92824 1860 aa15.13■□□□□ 0.01
RPS28-203ENST00000600659 OR2A25A4D2G3 310 aa15.13■□□□□ 0.01
RPS28-203ENST00000600659 ZBTB14O43829 449 aa15.13■□□□□ 0.01
RPS28-203ENST00000600659 RGS4P49798 205 aa15.13■□□□□ 0.01
RPS28-203ENST00000600659 SP140Q13342 867 aa15.13■□□□□ 0.01
RPS28-203ENST00000600659 PDAP1Q13442 181 aaKnown RBP15.13■□□□□ 0.01
RPS28-203ENST00000600659 COL9A2Q14055 689 aaPredicted RBP15.13■□□□□ 0.01
RPS28-203ENST00000600659 EFTUD2Q15029 972 aaKnown RBP eCLIP15.13■□□□□ 0.011e-12■■■■□ 23.8
RPS28-203ENST00000600659 SF1Q15637 639 aaKnown RBP15.13■□□□□ 0.01
RPS28-203ENST00000600659 KBTBD12Q3ZCT8 623 aa15.13■□□□□ 0.01
RPS28-203ENST00000600659 FAM198BQ6UWH4 519 aa15.13■□□□□ 0.01
RPS28-203ENST00000600659 SBSNQ6UWP8 590 aa15.13■□□□□ 0.01
RPS28-203ENST00000600659 RNF44Q7L0R7 432 aa15.13■□□□□ 0.01
RPS28-203ENST00000600659 RELL1Q8IUW5 271 aa15.13■□□□□ 0.01
RPS28-203ENST00000600659 RAB42Q8N4Z0 105 aa15.13■□□□□ 0.01
RPS28-203ENST00000600659 MNS1Q8NEH6 495 aa15.13■□□□□ 0.01
RPS28-203ENST00000600659 CT55Q8WUE5 264 aa15.13■□□□□ 0.01
RPS28-203ENST00000600659 PDLIM5Q96HC4 596 aaKnown RBP15.13■□□□□ 0.01
RPS28-203ENST00000600659 GPR22Q99680 433 aa15.13■□□□□ 0.01
RPS28-203ENST00000600659 RBBP8Q99708 897 aa15.13■□□□□ 0.01
RPS28-203ENST00000600659 ACAT2Q9BWD1 397 aa15.13■□□□□ 0.01
RPS28-203ENST00000600659 GPN2Q9H9Y4 310 aaPredicted RBP15.13■□□□□ 0.01
RPS28-203ENST00000600659 EURLQ9NYK6 297 aa15.13■□□□□ 0.01
RPS28-203ENST00000600659 STOX2Q9P2F5 926 aaPredicted RBP15.13■□□□□ 0.01
RPS28-203ENST00000600659 MTO1Q9Y2Z2 717 aaKnown RBP15.13■□□□□ 0.01
RPS28-203ENST00000600659 TARM1B6A8C7 271 aa15.12■□□□□ 0.01
RPS28-203ENST00000600659 E7EQ34 232 aa15.12■□□□□ 0.01
RPS28-203ENST00000600659 SLC16A5O15375 505 aa15.12■□□□□ 0.01
RPS28-203ENST00000600659 ZNF749O43361 778 aa15.12■□□□□ 0.01
RPS28-203ENST00000600659 MT-ND3P03897 115 aa15.12■□□□□ 0.01
RPS28-203ENST00000600659 C8GP07360 202 aa15.12■□□□□ 0.01
RPS28-203ENST00000600659 DLSTP36957 453 aa15.12■□□□□ 0.01
RPS28-203ENST00000600659 HSD17B2P37059 387 aa15.12■□□□□ 0.01
RPS28-203ENST00000600659 DNASE1L3Q13609 305 aa15.12■□□□□ 0.01
RPS28-203ENST00000600659 PPP1R3AQ16821 1122 aa15.12■□□□□ 0.01
RPS28-203ENST00000600659 ZNF425Q6IV72 752 aa15.12■□□□□ 0.01
RPS28-203ENST00000600659 MYO1HQ8N1T3 1032 aa15.12■□□□□ 0.01
RPS28-203ENST00000600659 ANKRD49Q8WVL7 239 aa15.12■□□□□ 0.01
RPS28-203ENST00000600659 STARD8Q92502 1023 aa15.12■□□□□ 0.01
RPS28-203ENST00000600659 ZUFSPQ96AP4 578 aa15.12■□□□□ 0.01
RPS28-203ENST00000600659 UBL7Q96S82 380 aaPredicted RBP15.12■□□□□ 0.01
RPS28-203ENST00000600659 CPNE1Q99829 537 aa15.12■□□□□ 0.01
RPS28-203ENST00000600659 ACTR5Q9H9F9 607 aaPredicted RBP15.12■□□□□ 0.01
RPS28-203ENST00000600659 PARVBQ9HBI1 364 aa15.12■□□□□ 0.01
RPS28-203ENST00000600659 NINJ2Q9NZG7 142 aa15.12■□□□□ 0.01
RPS28-203ENST00000600659 TAC3Q9UHF0 121 aa15.12■□□□□ 0.01
RPS28-203ENST00000600659 PADI1Q9ULC6 663 aa15.12■□□□□ 0.01
RPS28-203ENST00000600659 PLCL2Q9UPR0 1127 aa15.12■□□□□ 0.01
RPS28-203ENST00000600659 SH2B3Q9UQQ2 575 aa15.12■□□□□ 0.01
RPS28-203ENST00000600659 PCDHGA6Q9Y5G7 932 aa15.12■□□□□ 0.01
RPS28-203ENST00000600659 MED13Q9UHV7 2174 aa15.11■□□□□ 0.01
RPS28-203ENST00000600659 MEN1O00255 615 aa15.11■□□□□ 0.01
RPS28-203ENST00000600659 ATXN7O15265 892 aaPredicted RBP15.11■□□□□ 0.01
RPS28-203ENST00000600659 NKX2-8O15522 239 aa15.11■□□□□ 0.01
RPS28-203ENST00000600659 FAM155BO75949 473 aa15.11■□□□□ 0.01
RPS28-203ENST00000600659 SYF2O95926 243 aaKnown RBP15.11■□□□□ 0.01
RPS28-203ENST00000600659 ITGAXP20702 1163 aa15.11■□□□□ 0.01
RPS28-203ENST00000600659 CYP2A7P20853 494 aa15.11■□□□□ 0.01
RPS28-203ENST00000600659 GP5P40197 560 aa15.11■□□□□ 0.01
RPS28-203ENST00000600659 IL2P60568 153 aa15.11■□□□□ 0.01
RPS28-203ENST00000600659 TBPL1P62380 186 aa15.11■□□□□ 0.01
RPS28-203ENST00000600659 RHDQ02161 417 aa15.11■□□□□ 0.01
RPS28-203ENST00000600659 PRDX1Q06830 199 aaKnown RBP15.11■□□□□ 0.01
RPS28-203ENST00000600659 ZKSCAN8Q15776 578 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms