RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 MOCS1Q9NZB8 636 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.26□□□□□ -0.29
IRF3-225ENST00000600022 HACD3Q9P035 362 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 FKBPLQ9UIM3 349 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 ZNF180Q9UJW8 692 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 TCFL5Q9UL49 500 aa13.26□□□□□ -0.29
IRF3-225ENST00000600022 DNMT3AQ9Y6K1 912 aaPredicted RBP13.26□□□□□ -0.29
IRF3-225ENST00000600022 CACNA1DQ01668 2161 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 FAM159BA6NKW6 160 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 CCL22O00626 93 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 LDB2O43679 373 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 ST6GAL1P15907 406 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 MSH3P20585 1137 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 PSMA3P25788 255 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 AKT1P31749 480 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 CDKN1CP49918 316 aaPredicted RBP13.25□□□□□ -0.29
IRF3-225ENST00000600022 ZNF140P52738 457 aaPredicted RBP13.25□□□□□ -0.29
IRF3-225ENST00000600022 XIAPP98170 497 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 PDE1BQ01064 536 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 ACVR1Q04771 509 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 GABPB1Q06547 395 aaPredicted RBP13.25□□□□□ -0.29
IRF3-225ENST00000600022 PLEKHN1Q494U1 663 aaPredicted RBP13.25□□□□□ -0.29
IRF3-225ENST00000600022 ANKRD20A4Q4UJ75 823 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 SLC6A19Q695T7 634 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 KIAA0930Q6ICG6 404 aaPredicted RBP13.25□□□□□ -0.29
IRF3-225ENST00000600022 TRMT10BQ6PF06 316 aaKnown RBP13.25□□□□□ -0.29
IRF3-225ENST00000600022 FAM198BQ6UWH4 519 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 OOSP2Q86WS3 158 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 OR4K2Q8NGD2 314 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 OR2L2Q8NH16 312 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 PRR7Q8TB68 274 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 CLIP3Q96DZ5 547 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 MFSD3Q96ES6 412 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 CERS2Q96G23 380 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 TCTN2Q96GX1 697 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 CD180Q99467 661 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 C19orf43Q9BQ61 176 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 XKR8Q9H6D3 395 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 KIR3DX1Q9H7L2 352 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 CHRAC1Q9NRG0 131 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 C20orf96Q9NUD7 363 aaPredicted RBP13.25□□□□□ -0.29
IRF3-225ENST00000600022 NKIRAS1Q9NYS0 192 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 ADAM21Q9UKJ8 722 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 BTRCQ9Y297 605 aa13.25□□□□□ -0.29
IRF3-225ENST00000600022 CREBBPQ92793 2442 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 TMEM150CB9EJG8 249 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 STX7O15400 261 aaKnown RBP13.24□□□□□ -0.29
IRF3-225ENST00000600022 PRAMEF1O95521 474 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 CRTAMO95727 393 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 CLDN1O95832 211 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 KLK3P07288 261 aaPredicted RBP13.24□□□□□ -0.29
IRF3-225ENST00000600022 SNRPAP09012 282 aaKnown RBP13.24□□□□□ -0.29
IRF3-225ENST00000600022 PRSS56P0CW18 603 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 CDH3P22223 829 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 NMBRP28336 390 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 PRDX3P30048 256 aaKnown RBP13.24□□□□□ -0.29
IRF3-225ENST00000600022 TMPRSS15P98073 1019 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 ILF2Q12905 390 aaKnown RBP13.24□□□□□ -0.29
IRF3-225ENST00000600022 ATP1A4Q13733 1029 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 THOC5Q13769 683 aaKnown RBP13.24□□□□□ -0.29
IRF3-225ENST00000600022 TAF1AQ15573 450 aaPredicted RBP13.24□□□□□ -0.29
IRF3-225ENST00000600022 TSTD2Q5T7W7 516 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 SRRM1Q8IYB3 904 aaKnown RBP13.24□□□□□ -0.29
IRF3-225ENST00000600022 OR13C4Q8NGS5 318 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 OR13J1Q8NGT2 312 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 CALML6Q8TD86 181 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 ALKBH8Q96BT7 664 aaKnown RBP13.24□□□□□ -0.29
IRF3-225ENST00000600022 ZNF778Q96MU6 729 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 DHRS4Q9BTZ2 278 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 NLNQ9BYT8 704 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 ASB8Q9H765 288 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 KCNK9Q9NPC2 374 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 SMOXQ9NWM0 555 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 EURLQ9NYK6 297 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 MAP10Q9P2G4 905 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 CTNNAL1Q9UBT7 734 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 POMT2Q9UKY4 750 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 SNX7Q9UNH6 387 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 PKP3Q9Y446 797 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 SEC16AO15027 2179 aa13.24□□□□□ -0.29
IRF3-225ENST00000600022 BTN3A1O00481 513 aa13.23□□□□□ -0.29
IRF3-225ENST00000600022 SRP72O76094 671 aaKnown RBP13.23□□□□□ -0.29
IRF3-225ENST00000600022 RAB40ALP0C0E4 278 aa13.23□□□□□ -0.29
IRF3-225ENST00000600022 ARNTP27540 789 aa13.23□□□□□ -0.29
IRF3-225ENST00000600022 PDHA2P29803 388 aa13.23□□□□□ -0.29
IRF3-225ENST00000600022 PREPP48147 710 aa13.23□□□□□ -0.29
IRF3-225ENST00000600022 PRKG2Q13237 762 aa13.23□□□□□ -0.29
IRF3-225ENST00000600022 ITGA9Q13797 1035 aa13.23□□□□□ -0.29
IRF3-225ENST00000600022 EFTUD2Q15029 972 aaKnown RBP eCLIP13.23□□□□□ -0.296e-7■■■■□ 23.8
IRF3-225ENST00000600022 TNFAIP8L3Q5GJ75 292 aa13.23□□□□□ -0.29
IRF3-225ENST00000600022 TMTC4Q5T4D3 741 aa13.23□□□□□ -0.29
IRF3-225ENST00000600022 ARMC6Q6NXE6 501 aa13.23□□□□□ -0.29
IRF3-225ENST00000600022 CYB5D1Q6P9G0 228 aa13.23□□□□□ -0.29
IRF3-225ENST00000600022 KCNMB4Q86W47 210 aa13.23□□□□□ -0.29
IRF3-225ENST00000600022 CNTN4Q8IWV2 1026 aa13.23□□□□□ -0.29
IRF3-225ENST00000600022 SYTL1Q8IYJ3 562 aa13.23□□□□□ -0.29
IRF3-225ENST00000600022 CISD2Q8N5K1 135 aaKnown RBP13.23□□□□□ -0.29
IRF3-225ENST00000600022 DCAKDQ8WVC6 231 aa13.23□□□□□ -0.29
IRF3-225ENST00000600022 SNRNP40Q96DI7 357 aaKnown RBP13.23□□□□□ -0.29
IRF3-225ENST00000600022 LRFN5Q96NI6 719 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms